Shewanella marisflavi: CFF01_07620
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Entry
CFF01_07620 CDS
T05400
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
Organism
smav
Shewanella marisflavi
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA
AAA_16
AAA_5
HTH_50
AAA_2
HTH_30
nSTAND1
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ASJ96468
UniProt:
A0AAC9TZA6
LinkDB
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Position
1751059..1752411
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AA seq
450 aa
AA seq
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MEQAKLHILVVEDEPDQRELIVQMLTANQYQVESADSVEQAIVMIKAAAPDLVFSDWKLG
QLTGMDLLNYVRREHPDMGFIIATAYGTITHAVDAMQAGADDYLAKPYQRQSLLLAIEKV
AKSIALKRQNRRLSSELSQQQELVGLVGRSALMQKVYQRVQRVSATDATVLIGGESGTGK
ELAARALYQLSGRSHKPFVAINCGAIPESLAEAELFGAEKGAYTGATTQKIGKLEAADGG
TVFLDEIGELPLLQQTKLLRFLQEGVISRLGQNSEIKLDVRVIAATHRDLQQEVAEGRFR
EDLYYRLNVVPIHMPALRERTEDIGRLVEHFLKLHASQYGVEVPKLSRDTLKALLDYSWP
GNVRELANRIERFVLLGDEQEMVQELITAPQPLDTSRFVLPENGIQWESFEKDCLRQAMN
RFEGNRTKAAQCLGLSYKAFLYRLEKYQLV
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggaacaggctaagttacatattttagtggtggaagatgagcccgatcagcgtgagctg
attgtgcagatgttgacggctaaccaatatcaggtggagagtgccgacagcgtagagcag
gcgattgtgatgataaaagccgctgcgcctgacttagtcttttccgattggaaactcggg
cagttgaccggtatggatctgcttaactatgtgcgccgtgagcatccggacatgggcttt
atcatagcaacagcctacggcactattacccatgcggtggatgcgatgcaggcgggcgcc
gatgattatctggctaagccctatcagcgtcagagccttctgttggcgatcgagaaggtc
gctaagtcgattgccctgaagcggcaaaatcgtcgtctctcctccgagctatcacagcag
caggaattggttggcttggtggggcgttcagccttgatgcagaaggtctaccagcgggta
cagcgagtcagcgccacagatgccacagtgttgattggtggtgagagtggtacaggtaaa
gagttagcggcgcgtgcattgtatcagctgtcgggacgcagtcataaaccctttgttgcc
attaactgcggcgccattcctgaatctttggcagaggccgagttgtttggtgccgagaag
ggcgcttataccggcgccacaacacaaaagataggtaagctggaggcggcagacggcggc
actgtgtttctcgatgagataggcgagttgcctctactacagcagaccaagctgctgcgt
tttctgcaagaaggggtgatctctcgcttggggcagaacagcgagattaaattggatgtc
agagtcattgcggcgactcacagggatctgcagcaggaagtggccgaggggcgttttcgc
gaagatctctactatcgtctgaatgtggtgcccatacatatgcctgcgctgcgagaacgc
accgaggatatcggccgcttggtagagcattttcttaaactgcatgccagtcaatatggt
gtggaagtaccaaagcttagccgagataccttaaaggcattgctggactacagctggccc
ggcaacgtacgtgagctggctaatcgtatcgaacgttttgtcttgctcggcgatgaacag
gagatggtgcaggagctgattaccgcgcctcaacctctggataccagccgttttgtactg
cccgaaaatgggatccaatgggaaagtttcgagaaggattgtctgcgccaggcaatgaac
cgtttcgaggggaatcgcaccaaagcggcgcaatgtttaggtttgagttataaggcgttt
ctttatcgcttagagaagtatcagctggtgtga
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