Shewanella marisflavi: CFF01_07795
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Entry
CFF01_07795 CDS
T05400
Name
(GenBank) tRNA pseudouridine(38-40) synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
smav
Shewanella marisflavi
Brite
KEGG Orthology (KO) [BR:
smav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smav03016
]
CFF01_07795
Enzymes [BR:
smav01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CFF01_07795
Transfer RNA biogenesis [BR:
smav03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CFF01_07795
Prokaryotic type
CFF01_07795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ASJ96500
UniProt:
A0AAC9TYC0
LinkDB
All DBs
Position
1783805..1784590
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AA seq
261 aa
AA seq
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MRVALGIEYDGSRYFGWQRQAEVDSVQAQLERALSFVANEPISIQCAGRTDAGVHATGQV
IHFETSAVRKESAWTLGVNVNLPDDIAVRWAKEVDDEFHARFTATARRYRYMIYNHQFRP
GILRSGVSHYPGLIDETKMHEAAQYLLGEQDFTSFRAIQCQSNTPFRCVHEVNVTRQGMY
ICVDIKANAFLHHMVRNIVGSLLEVGYGRQPVSWIEELLALKDRTKAAATAKPNGLYLVD
VTYPEQYALPKLALGPLFMLD
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtagcattaggtatcgaatatgatggcagccgttattttggctggcaacgtcag
gccgaagtcgattcggtacaagcccagctcgagagagcgctctcttttgttgccaacgaa
cccatttcgattcaatgcgccggacgcacagatgccggtgtgcacgccacggggcaggtg
atccattttgagaccagcgccgtgcgtaaagagagtgcctggaccttaggtgttaacgtt
aacttgcccgatgatattgccgtgcgttgggccaaggaggtggacgatgagtttcatgcc
cgtttcaccgccaccgcccgtcgttaccgttacatgatctataaccatcagttccgtccg
gggatcctccgctctggggtgagtcattatccggggctgattgatgaaaccaagatgcat
gaggcggctcagtacctgctgggcgagcaggattttaccagctttcgtgccattcaatgt
cagtccaacaccccgtttcgctgtgttcacgaggtcaatgtgacgcgtcaggggatgtat
atctgcgtcgatatcaaagccaatgccttcttgcatcacatggtacgtaacattgtcggc
tccctgcttgaggtgggctatggccgtcaacctgtgagctggattgaagagctgctggca
ttaaaagatcgcactaaggcggcggcaacggctaagcctaatggcctgtatctggtggat
gtgacctatcctgagcagtatgccttacctaagctggccctgggcccgctgtttatgctc
gattaa
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