Shewanella marisflavi: CFF01_07940
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Entry
CFF01_07940 CDS
T05400
Symbol
trpB
Name
(GenBank) tryptophan synthase subunit beta
KO
K01696
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
smav
Shewanella marisflavi
Pathway
smav00260
Glycine, serine and threonine metabolism
smav00400
Phenylalanine, tyrosine and tryptophan biosynthesis
smav01100
Metabolic pathways
smav01110
Biosynthesis of secondary metabolites
smav01230
Biosynthesis of amino acids
Module
smav_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
smav00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CFF01_07940 (trpB)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
CFF01_07940 (trpB)
Enzymes [BR:
smav01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
CFF01_07940 (trpB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-ProteinID:
ASJ98615
UniProt:
A0AAC9U1X2
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All DBs
Position
complement(1814465..1815682)
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AA seq
405 aa
AA seq
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MTKLAPYFGEYGGMFVPQILMPALKQLESAFVDAQNDESFKAEFSDLLKNYAGRPTALTL
TRNLSPNPLVKIYLKREDLLHGGAHKTNQVLGQALLAKRMGKKEIIAETGAGQHGVATAL
ACALLGLKCKVYMGAKDVERQSPNVFRMRLMGAEVIPVTSGSATLKDACNEAMRDWSGSY
DKAHYLLGTAAGPHPFPTIVREFQRMIGEETKAQILEREGRLPDAVIACVGGGSNAIGMF
ADFINEPSVKLIGVEPAGLGIDTPKHGAPLKHGKTGIFFGMKAPLMQDREGQIEESYSIS
AGLDFPSVGPQHAHLAAIGRATYESATDDEALEAFQLLARSEGIIPALESAHALAYAIKL
AETATEETLLVVNLSGRGDKDIFTVADILEQKDNQAATDKESGNE
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgactaagttggccccctattttggtgaatatggcggcatgtttgtcccccagatcctg
atgccagcccttaagcagctggaaagcgccttcgtcgacgctcaaaacgatgagagcttc
aaggcggaattcagcgatctgctgaaaaactatgccggtcgcccaaccgccctaactcta
acccgtaatctcagccctaacccactggtgaagatctacctaaaacgtgaagatctgctc
catggcggcgcccacaagaccaaccaggtattgggccaagccctgttagccaagcgtatg
ggtaaaaaagagatcatcgccgaaactggcgcgggtcagcacggggttgctacggcgctg
gcctgtgcccttttgggtctaaaatgtaaggtttacatgggcgccaaagatgttgagcgt
caatcacccaatgtgtttcgtatgcgtctaatgggcgccgaggtgatccctgtcacctct
ggctctgccaccttaaaagatgcctgcaacgaggcgatgcgcgactggtccggtagctat
gacaaggcccattacctattgggcaccgcggccggaccacatcccttccccaccatagtg
cgcgaatttcagcgcatgataggcgaagagactaaggcgcagatcctcgaacgtgagggc
cgcctacccgacgcggtgatcgcctgtgtcggcggcggatcaaacgccatcggcatgttc
gccgactttatcaatgaaccctcagtcaaattgatcggtgtcgagccagcgggcttaggc
atagacaccccgaagcatggcgcgccgcttaaacacggtaagacagggatcttcttcggc
atgaaggcgcctctaatgcaagatagagagggccagattgaagagtcttactctatctcg
gcaggcctggatttcccatcagtgggaccacagcacgcccatctggctgccatcgggcgc
gccacctatgagtcggccacagatgacgaggcactcgaggccttccagctgctggctcgc
agtgaagggatcatcccggcgctggaatcggctcatgccctggcctatgccattaagcta
gccgagaccgccactgaagaaaccctgctagtggttaacctgtctggtcgcggtgacaaa
gatatctttaccgtcgccgatattttagagcaaaaagacaatcaagcagccacagataag
gagagcggcaatgagtaa
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