Shewanella marisflavi: CFF01_08280
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Entry
CFF01_08280 CDS
T05400
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
smav
Shewanella marisflavi
Pathway
smav00061
Fatty acid biosynthesis
smav00071
Fatty acid degradation
smav01100
Metabolic pathways
smav01212
Fatty acid metabolism
smav02024
Quorum sensing
smav04146
Peroxisome
Module
smav_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
smav00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CFF01_08280
00071 Fatty acid degradation
CFF01_08280
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CFF01_08280
09145 Cellular community - prokaryotes
02024 Quorum sensing
CFF01_08280
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
smav01004
]
CFF01_08280
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smav04147
]
CFF01_08280
Enzymes [BR:
smav01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CFF01_08280
Lipid biosynthesis proteins [BR:
smav01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CFF01_08280
Exosome [BR:
smav04147
]
Exosomal proteins
Exosomal proteins of breast milk
CFF01_08280
Exosomal proteins of breast cancer cells
CFF01_08280
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Pept_S41_N
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ASJ96587
UniProt:
A0AAC9TZT4
LinkDB
All DBs
Position
1897931..1899604
Genome browser
AA seq
557 aa
AA seq
DB search
MEQLWTKNLPDDVPAIIDAQQYSSLIDLFERSVAQYADQPAFVNMGATLTYRKLEERSRA
FAAYLQNELKLEKGDRVAIMMPNLLQYPIALFGVLRAGLVVVNVNPLYTPRELKHQLNDS
GAKAIVVVSNFANTLEQVVDQTPVKSVILTGLGDLLSAPKRTLVNFVVKYIKKMVPKYHL
PHAISMRQSLSKGRRLQYVKPTTKSDDIAFLQYTGGTTGVSKGAMLTHGNIVSNLLQADA
SYSPLLENGKEFVVTALPLYHIFALTVNCLLFLHKGANNLLITNPRDIPAFVSELKKHPF
TALTGVNTLFNALVSSEEFKTLDFSNLKLSIGGGMAVQRAVADKWQGITKTRLLEGYGLT
EASPLLTCCPYNLEGYNGSIGFPVANTDMQVRDEEGNVLPQGETGELFAKGPQVMKGYWQ
RPEETAKVIDKDGYLATGDIGYMDEQGFFYIVDRKKDMILVSGFNVFPNEVEEVVALHPK
VVEVAAVGVPHEVSGELVKVFVVANDKSLTEEQVIKHCRHHLTGYKIPKLVEFRDELPKS
NVGKILRRELRDEAKSA
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
gtggaacagctttggacgaaaaatttacccgatgatgtgcccgccattatagatgcgcag
caatatagctcgcttatcgacctgtttgagcgctcggtcgctcagtatgccgatcagccc
gcctttgtgaacatgggagcaacgctgacctatcgtaaacttgaagaacgtagtcgcgcc
tttgccgcctatctgcaaaatgaacttaagctggagaagggcgatcgcgtggcgatcatg
atgcctaatctgctgcagtatcctatcgcactgtttggtgtgttgcgtgcaggcttggtg
gtggttaacgtaaaccctctttataccccgcgtgagctaaagcatcagttgaatgactcg
ggtgcaaaggccatcgttgtggtctctaattttgccaatacccttgagcaggtggtagac
caaacgccggttaagagtgttattttgaccggtcttggggatctcttgagcgcgccaaaa
cgcaccttggtgaactttgtggtgaagtacatcaagaagatggtacctaaatatcatctg
ccccatgctatctctatgcgccaatcactctctaaaggacgccgtttgcagtatgtcaaa
ccgaccactaagagtgatgatattgcatttttacaatacacaggcggtaccacaggagtc
tctaagggcgctatgttgacccacggcaatattgtcagcaacctgcttcaggccgatgcg
tcctattcacctttgctggaaaacggcaaagagtttgtggtgactgcgctgccgctctat
cacatcttcgcgttgacggtgaactgtttgctcttccttcataaaggtgccaacaacctg
ctgatcactaaccctagggatatccctgcgtttgtgtctgagctgaagaaacatcctttt
actgcactgacaggggttaataccctgtttaacgccttggtgagttcggaagagtttaag
actctggatttctccaatctgaaattgtctatcggtggtggcatggcggtgcagcgcgcc
gtagccgataagtggcaagggatcactaagacgcgtctgctggaaggttatggcctgact
gaggcgtcgccgctgctgacctgctgcccttataacttggaaggctataacggttcaatc
ggcttcccggtagccaacacagatatgcaggttcgcgacgaggagggcaatgtgctgcct
caaggtgagactggcgagctctttgccaaggggccgcaggtgatgaaaggttactggcag
cgccctgaagagaccgccaaggtgatcgacaaggatggctacctggctactggcgatatt
ggctatatggatgagcagggctttttctatattgtcgatcgcaagaaagatatgatcttg
gtatcgggctttaatgtcttccctaatgaggttgaagaggttgtcgccctgcatcccaag
gtggtcgaagtggctgctgtgggtgtgcctcacgaggtcagcggtgagttggtgaaggta
tttgtggttgctaacgataaatctttgaccgaagagcaggtgatcaagcactgtcgtcat
catttgacgggatataaaattcctaagctggtagaatttagggatgagctacctaagagt
aatgtgggtaagatcttgcgtcgcgagttacgcgacgaagcaaaatccgcgtaa
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