Shewanella marisflavi: CFF01_08365
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Entry
CFF01_08365 CDS
T05400
Name
(GenBank) hypothetical protein
KO
K09800
translocation and assembly module TamB
Organism
smav
Shewanella marisflavi
Brite
KEGG Orthology (KO) [BR:
smav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smav02000
]
CFF01_08365
Transporters [BR:
smav02000
]
Other transporters
Pores ion channels [TC:
1
]
CFF01_08365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Yop-YscD_ppl_1st
Motif
Other DBs
NCBI-ProteinID:
ASJ96603
UniProt:
A0AAC9TZK3
LinkDB
All DBs
Position
complement(1914943..1918842)
Genome browser
AA seq
1299 aa
AA seq
DB search
MIDQPNELDLAQTDNQGAAPVKPLSPFKRLLRWLRNLIRLVFYLPLALLIMLALMIGTPL
GTRLSVILADALVPNLSLSYSAGRLNGQLTLDHAHWQMAGIVVDTQDLTLNWRPLCLLQR
QLCVDTLSASAVQVDIDTDELKGKDDNPDLTTESLTTEGSEPIKEEVAEADDQRLVLPFG
IVLNQGDLKQVKVRVNQMQFNADALTAKASWLETGLRVNQLASQGLYIDIPLSAETDQAA
DADQADADSWPLTQLPEVAIPMPIFVDTAELTNSELRLGQRIDHFQAFALQGSYVGYKIT
LDSLDVQHDYGKAHLDGHMSLEQDYPMALNLQADLASQQLTELPQLKRQQLEAEINGGFA
ALAVTLRGKGHLDLNLDGEINLDSPQLPYRVALTSPHLMWPLAEPEYETKILTLNSQGSI
QKQSVTLSGDLKTPYHPWLTLDAEFEHQTKQLSFAKLDVDSEMGKAKLTGQLAYGDKLHW
DLQLDTQTLDLSQLNITTEQPLPETEINGSLHSQGDYSDKQWAIGVSNADLQGHVANYPL
RLQGDIAINDKFQLNAKQLQLNALESELTLSGRVDDNWSLDGQLSVPALSLWDPKASGAI
EAVINVSGDDEHPEIAINADSVELQYADIQVEKAKLIAFYRPQDEHQFALSLKSSDIKRQ
NVSLSTLTLGIKGDLNKQKLGLQTYGDIQLQTSIASSFDDKAQRFDASVNRINLKSRLGA
MALDKPIALYWDQQQGYGEVAPFCWQHEAASLCLTDIAELGDKGDTQLQFSGDLGALLSP
ILPDRLTWRGPTQLDALFHWAKGEKPTGEIELAMAPGQFDLTTNRRQINAQYKYLQLSAQ
LSPERFTADAKFESERFAKLNAGVEISTDPEQRLSGQIDLKDINLHALADFTPQLEVLDG
RVSSAITLGGTLESPQLTGSVDLIDGQLAAAANPTLLDNIALTLSLVGQGAKLTSQWTMG
EGKAELEGDLNWQEGLQGDFQFKGDKLAIIQPPLAILDVSPDLTIGFSNKHLDIQGNVDI
PSGHIKIVQLPEGGVAQSDDVIFNDSLSTQVQEKNPIAITSQIMVNVGDKLNIDGMGLRG
MLQGTLELRQAAFKPPLLYGDIRVVNGTYKFMGQTLSINAGEVQFIGPMAVPNLNIEATR
EIKEDDVIAGVRITGTPAKPVVTLFSNPAKEQAEILSYIIKGTGLNNSDSDQNNALMMGA
ALTLGNQLGDNAFSNVGSSASGVIEKLGISNVQLDANDDGKVAISGYIGDDLMVKYGVGV
FNPGYEMTVRYYLMSQLYLESVSGTISKTLDIYYSFDID
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atgattgaccagcccaatgagctagatctggcccaaaccgataatcagggcgcggcgccg
gtcaagcccctaagcccctttaagcgactgcttcgctggctgcgcaacctgatccgcctg
gttttctatctacccttagctctgctgatcatgctggccttaatgatcggcacccctctg
ggtacgcgcctgtcagtcatcttggccgatgccttagtgcccaatttatcgctcagctac
agtgctggccggctcaatggccaattaaccctagatcatgcccactggcagatggcgggc
atagtggttgatactcaagatctgaccctcaactggcgtccgctatgtctgctgcagcgc
caactttgtgtcgacaccttaagcgcctcggcggtacaagtcgacatagatacagacgag
cttaagggtaaggatgacaacccagacctaacgacagagtcacttaccactgaaggatca
gagcccatcaaagaggaggtagcagaggccgatgatcagcggctggtacttccctttggc
atagtgctcaatcaaggcgacctcaaacaagtcaaggttcgggtcaaccagatgcagttt
aatgccgacgccctcacagccaaggccagctggttagaaacagggctcagggtaaaccaa
ctggccagccaaggtctctatatcgatattccactgtctgcagaaactgaccaggctgct
gacgccgaccaagctgatgccgatagctggccactcacccagttgccagaggtagccatt
cccatgcctatctttgtcgataccgccgaactcaccaacagcgagctaaggctggggcaa
cgaatcgatcatttccaagccttcgccctgcaaggcagttatgtgggctacaagatcacc
ttggacagcctagatgtgcagcatgactatggtaaggcccacctagatggccacatgagc
ctagagcaagattaccctatggcgctgaacctgcaggccgatctcgccagtcagcagctc
accgagctgccacagttgaaacgccagcagctagaagcggaaataaacggtggctttgcc
gcgctcgcggtaacactaagaggcaaaggccatttagatcttaacctggatggcgaaatc
aacctagacagcccacaactgccctatcgtgtggcgctaaccagcccgcatctgatgtgg
ccgcttgccgagcctgaatatgaaaccaaaatccttacactcaatagtcaaggtagcatt
cagaaacaaagtgtcaccctaagcggcgacctgaagaccccttatcatccttggcttacg
ctcgatgccgagtttgaacaccaaactaagcaactctcgttcgctaagctggatgtcgac
agtgagatgggcaaggccaaactcacaggacaactggcttatggcgacaaactccactgg
gatctacagctcgacacccagacactggatctgagccagctcaatatcaccactgagcag
cccctgcccgagacagaaattaacggcagcttgcacagccaaggcgactatagtgacaag
cagtgggcgattggcgtcagcaatgccgatcttcaaggtcacgttgcaaactatccgctg
cggcttcaaggcgatattgccatcaatgacaaattccagcttaatgccaagcagctacag
ctcaatgccttagagtccgagcttaccttgtcgggacgtgtcgatgacaactggtctctc
gatggtcagctgagtgtaccggcgcttagcctttgggaccccaaggccagtggcgctatc
gaggcggttatcaatgtctcaggtgacgacgagcacccggaaattgccatcaatgccgat
agtgtggagctgcaatacgccgatatacaagtcgagaaggcaaaactgatcgccttctat
cgtccccaggatgagcatcaatttgccctgtcgttaaaatcatccgatatcaaacggcaa
aacgttagcttgagtaccctcaccttagggatcaaaggcgatctcaataaacaaaaattg
gggctgcagacctatggcgatattcagctgcaaacctccatcgcatccagctttgatgat
aaagcccaaaggttcgatgccagcgtcaatcgtattaaccttaaatctcgcctaggcgcc
atggcactggacaagcccatagcactctattgggatcagcaacaaggctatggtgaggtc
gcgcctttctgttggcaacatgaagccgccagcctttgcctgaccgacattgcagaactt
ggcgacaagggcgatacccagctgcagtttagcggtgatcttggcgcgctgctttcgccc
atcttacccgatcgtctgacctggcggggaccgacccagctcgacgctctatttcattgg
gccaaaggagagaaacctacaggcgagattgaactggcgatggcacccggccagtttgac
ttaaccaccaacagacgccagattaacgcgcaatataagtatctgcagctgagcgcacag
ctctcccctgagcgttttaccgccgatgccaagttcgagtctgaacgtttcgctaagctg
aacgccggggtagaaatcagcacagatcccgagcaacgtctcagcggccaaatcgaccta
aaagatatcaacctccatgcgctggcagactttactccacagcttgaggtactcgacggc
cgggtgagcagtgccattacacttggcggcaccctagagagcccgcagctgaccggctca
gttgacctcatcgacgggcaattagccgcggcggccaacccgacactgctggacaacata
gcgctaacactctcacttgtgggccaaggggctaaactgacgagccagtggaccatgggc
gaaggcaaggcagaactcgaaggggatctgaactggcaagagggtctacaaggagatttt
cagttcaaaggcgataaacttgcgattattcaaccgccgctggctatcttagatgtctca
cctgacctcaccataggctttagcaacaagcacttagatatccaagggaatgtagatatc
ccttcaggccatatcaagatagtacagttgcccgaaggtggtgtggcgcaatcggatgat
gtgatctttaacgacagtctgtcgacacaggtgcaggaaaaaaatcctatcgccattacc
agtcaaatcatggtcaatgtcggtgacaagctcaacatcgacggcatggggctgcggggc
atgctacagggtactctggaactgcgccaggcggcctttaaacctcctctgctctacggt
gacatcagagtggtcaatggcacctataaattcatgggccagaccctgtcgatcaatgct
ggtgaggttcagtttattggccctatggccgtgccgaacctgaatattgaagcgacacgg
gagatcaaagaagatgatgttatcgcgggcgtgcgcatcaccggcacaccggcgaaacct
gtggtcaccctcttttcaaacccagccaaagagcaagctgagatcctctcttacatcatc
aagggaactgggctgaataactcagattcagatcaaaacaatgccttgatgatgggcgcc
gccctgaccctgggcaatcagctcggcgataatgccttttccaatgtgggtagctctgca
agtggggtgatagaaaagctggggatctctaacgttcaactcgatgccaacgatgacggt
aaagttgccataagcggctatatcggcgatgaccttatggtcaaatacggcgtgggcgta
ttcaacccaggttatgagatgactgtgcgctactacctgatgtctcagctctatctggaa
agcgtctcaggcaccatctctaagactttagatatctactacagcttcgatatcgattaa
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integrated database retrieval system