Shewanella marisflavi: CFF01_08885
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Entry
CFF01_08885 CDS
T05400
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
smav
Shewanella marisflavi
Pathway
smav00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
smav00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CFF01_08885
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
smav01007
]
CFF01_08885
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smav03016
]
CFF01_08885
03029 Mitochondrial biogenesis [BR:
smav03029
]
CFF01_08885
Enzymes [BR:
smav01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
CFF01_08885
Amino acid related enzymes [BR:
smav01007
]
Aminoacyl-tRNA synthetase
Class II (A)
CFF01_08885
Transfer RNA biogenesis [BR:
smav03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CFF01_08885
Prokaryotic type
Other AARSs
CFF01_08885
Mitochondrial biogenesis [BR:
smav03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
CFF01_08885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
ASJ96691
UniProt:
A0AAC9U197
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All DBs
Position
2045017..2046795
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AA seq
592 aa
AA seq
DB search
MRSHYCGDVNRSHVGEEVTLVGWVNRSRDLGGVVFLDLRDREGVIQVVYDPDLPEVFDVA
STLRSEFCVQVKGLVRARPDSQINDQMRTGEIEVLGKALTILNSAPALPINMDKNQHNTE
EQRLKYRYLDLRRPEMAERIIFRSKVTSAVRRFLDGNGFLDIETPILTKATPEGARDYLV
PSRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSF
MTSAEVMDKTEEMVRGLFKELLNVELGEFPKMTFAEAMRRYGSDKPDLRNPLELIDVADL
VKDVDFKVFQEPANDSEGRVAVLCVPGGASLSRKQLDEYGKYVNIYGAKGLAWMKVNELE
KGLEGIQSPVLKFLSEEVVNGILARTGAANGDLILFGADKANIVAEAMGALRLKVGEDFN
LLQGDWKPLWVVDFPMFERTSDGGLHAMHHPFTAPSGISPAELEANPTAAISDAYDMVLN
GCELGGGSVRIHNSEMQSAVFRILGINDEEAQEKFGFLLEALKYGTPPHAGLAFGLDRIV
MLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPVQLEELGVSVVEAKKEQE
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagtcattattgtggagacgttaatcggtctcatgttggggaagaagttactctc
gtaggttgggtcaatcgtagtcgcgatcttggcggcgttgtgtttcttgatctacgtgac
cgagaaggcgtgattcaggttgtttatgaccctgacttgccagaggtattcgatgtcgcc
agcacactgcgcagcgagttctgtgttcaggttaagggcctggttcgtgctcgccctgac
agccagatcaacgatcagatgcgcaccggtgaaatcgaggtattaggtaaggcgttgacc
atacttaatagcgcgccagctttgccgatcaacatggacaaaaatcaacacaatacagaa
gagcagcgccttaaatatcgctatctggacctgcgtcgccctgagatggccgagcgcatc
atcttccgttctaaggtcaccagcgccgtgcgtcgtttcctcgatggcaatggtttcctc
gatatcgaaacgcctattttgacaaaggcgacgccagaaggagcaagggattacctggta
cctagccgtacctataagggacagttcttcgccttaccacaatcgccacagttgtttaag
cagctgctgatgatgtcaggttttgatcgctactatcagatcgtcaaatgtttccgtgat
gaagatttgcgtgccgaccgccagcctgaatttactcagatcgatatcgaaacctccttt
atgacctctgctgaggtgatggataaaacagaagagatggttcgtggtctgtttaaagag
ttacttaatgtcgaactgggtgagtttcctaagatgaccttcgccgaggcgatgcgtcgt
tacggctctgacaagcctgatctacgtaacccgcttgaacttatcgatgtggctgatttg
gtcaaagacgttgactttaaagtgttccaagagccagcaaatgacagtgaaggccgtgtg
gccgtgctgtgtgtgccaggtggggccagcctgtctcgtaagcagctcgacgaatatggc
aagtatgtcaacatttatggcgccaaagggctggcatggatgaaggtcaacgagctggag
aaaggcctggaaggcattcagtcgccagtgcttaagttcctgagtgaagaggtggttaat
ggtatcctagcgcgcactggtgcggctaatggtgaccttatcctctttggtgcggacaag
gcaaacatagtggcagaagccatgggcgcactgcgtctgaaagtaggtgaagatttcaac
ctgctgcaaggtgactggaaaccactatgggtggttgacttcccaatgttcgagcgcacc
tctgacggcggtctgcacgccatgcaccatccgttcaccgcgccaagtggtatctcacct
gctgagctggaagccaacccaacggcagcaatttcggacgcctatgacatggtgcttaac
ggttgcgaactgggtggtggttcggtgcgtattcacaatagtgaaatgcaatctgccgtg
ttcagaattctggggatcaacgacgaggaagctcaagagaagtttggcttcctgcttgaa
gcgctcaagtatggtaccccaccacatgctggtttggcctttggtctggatcgtattgtg
atgctgatgacgggcgcaagctctattcgtgacgtgatggccttccctaagacaaccacc
gcggcatgtcctctgaccaacgcgcctggatttgctaacccagtccagctcgaggaactc
ggcgttagcgtagtcgaagcgaaaaaagaacaggaataa
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