Shewanella marisflavi: CFF01_09175
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Entry
CFF01_09175 CDS
T05400
Name
(GenBank) threonine--tRNA ligase
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
smav
Shewanella marisflavi
Pathway
smav00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
smav00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CFF01_09175
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
smav01007
]
CFF01_09175
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smav03016
]
CFF01_09175
Enzymes [BR:
smav01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
CFF01_09175
Amino acid related enzymes [BR:
smav01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
CFF01_09175
Transfer RNA biogenesis [BR:
smav03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CFF01_09175
Prokaryotic type
CFF01_09175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
TGS
Motif
Other DBs
NCBI-ProteinID:
ASJ96739
UniProt:
A0AAC9U046
LinkDB
All DBs
Position
2102721..2104649
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AA seq
642 aa
AA seq
DB search
MPVITLPDGSKREFANPVSTLDVAADIGPGLAKACIAGRVNGELKDACDLIETDADLAII
TAKDDEGVEILRHSCAHLLGHAIKQMWPETKMAIGPVIDNGFYYDVDLDHKLTEEDVAEL
EKRMLALAKTNYDVVKKVVSWQEARDTFEARGESYKMAILDENISQDDKPALYHHEEYTD
MCRGPHVPNMKFCHNFKLMSVAGAYWRGNSDNKMLQRIYGTAWADKKALKAHLTRLEEAA
KRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWSLFLELERFIRQKLGQYTYQEVKGPLMMD
RVLWERSGHWDKYSEAMFTTHSENREYAVKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGC
CHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQVQQEVSGCIKMVYDTYATFGFKDIVVKL
STRPEKRIGDDAMWDRAEQALMDALKANDIEYEILPGEGAFYGPKIEFTLHDCLDRAWQC
GTVQLDYALPGRLGATYVAEDNSRQTPVMIHRAILGSLERFIGILIEEYAGKFPTWLAPV
QAVVMNITDKQSEYVDEVVKLFKDQGIRASKDLRNEKIGFKIREHTLRRVPYLLVVGDQE
MENREVAVRTRDGVDLGKIQIDEFAAKMKDQISLRSLNLLEE
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgcctgttattacacttcccgatggcagcaaacgcgagtttgccaacccagtttcaaca
cttgatgtcgccgccgacattggcccaggtctggctaaggcctgtattgctggtcgcgta
aacggtgagcttaaagatgcctgcgatctgatcgagacagacgctgacctggctatcatc
accgcaaaagatgatgaaggtgttgagattttgcgtcactcttgtgctcaccttttaggt
catgcgattaagcagatgtggccagagaccaagatggcgattggacctgtgatcgataat
ggtttctactatgacgtggatctcgatcataagttgaccgaggaagatgtagccgagctt
gaaaaacgcatgctggcgctggcaaagactaactatgatgtagtcaagaaagtggttagc
tggcaagaagcccgcgatacatttgaagcgcgcggtgaaagttataagatggcgatcttg
gatgaaaacattagccaagatgataagccagctctgtaccatcacgaagaatacactgac
atgtgtcgtggcccccatgtgcctaacatgaagttctgtcataatttcaagttgatgagt
gttgctggtgcctactggcgtggtaactcagacaacaagatgctgcagcgtatctatggt
accgcttgggcagacaagaaggcccttaaggcacatctgactcgcctagaagaagcggct
aagcgtgaccatcgtaagataggtaagcagcttgatctttaccatatgcaggaagaagca
cctggcatggtgttctggcacaacgatggttggagcctgttcctcgagctggaaagattc
attcgtcagaaactgggtcagtacacctatcaagaggtgaaaggtcccttaatgatggac
cgtgttttgtgggagcgcagtggccactgggataaatattccgaagccatgttcaccact
cattcagaaaaccgtgaatatgcggtgaagccgatgaactgcccgggtcacgtacagatc
tttaaccaaggtcttaagtcttaccgtgacctgccattgcgtatggcagagtttggctgc
tgtcaccgcaacgaaccatcgggttcattacatggtttgatgcgtgttcgcggctttacc
caagacgacgcgcatatcttctgtactgaagagcaagtgcagcaggaagtcagcggctgt
atcaagatggtttatgatacctacgcaacttttggcttcaaagacatcgtagttaagcta
tcgactcgcccagaaaaacgcatcggggacgacgccatgtgggatcgtgccgagcaagcc
ttgatggatgcgctgaaagctaatgacatcgagtatgagatcctgccgggtgaaggtgcc
ttttacggtcctaagatagaatttactttgcatgactgtctagaccgtgcatggcaatgt
ggtactgtgcagcttgattacgctttaccagggcgtcttggtgcgacttatgtcgccgaa
gacaatagccgtcagacgccagtcatgatccaccgtgccattttaggttcgcttgagcgc
ttcatcggtattcttatcgaagagtatgcgggcaagttcccaacttggttggcaccggtt
caggccgtcgtgatgaatattaccgataaacagtcggaatatgttgacgaagtggtcaaa
ttatttaaagatcagggaattcgtgcctcgaaagacttgaggaatgaaaagataggcttt
aaaatacgcgaacacaccctaaggcgtgttccctatctattggtcgttggtgatcaagag
atggaaaatagggaagtcgcggtgcgaaccagagatggtgttgatcttggtaagattcaa
atcgatgaatttgccgccaagatgaaagatcaaatttcgctccgtagtctaaatttgttg
gaggaatag
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