Shewanella marisflavi: CFF01_09220
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Entry
CFF01_09220 CDS
T05400
Name
(GenBank) recombination factor protein RarA
KO
K07478
putative ATPase
Organism
smav
Shewanella marisflavi
Brite
KEGG Orthology (KO) [BR:
smav00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
CFF01_09220
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MgsA_C
AAA_assoc_2
AAA
RuvB_N
Mg_chelatase
AAA_16
AAA_5
AAA_30
AAA_22
Sigma54_activat
AAA_19
nSTAND3
AAA_2
AAA_14
Parvo_NS1
DUF815
ATPase_2
AAA_3
Sigma54_activ_2
RCF1-5-like_lid
AAA_28
AAA_11
AAA_24
AAA_17
AAA_25
TniB
NPHP3_N
ABC_tran
AAA_33
MeaB
RNA_helicase
IstB_IS21
DUF5906
AAA_18
PhoH
SRP54
AAA_7
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
ASJ96748
UniProt:
A0AAC9TZH7
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Position
2112413..2113744
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AA seq
443 aa
AA seq
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MSSLTFDFAPDFRPLAARMRPETLEQYIGQDHLLGEGKPLRQALEAGRAHSMMFWGPPGT
GKTTLAELVAHYANAHVERISAVTSGVKEIRAAIEHAKNVAQSRGQRTLLFVDEVHRFNK
SQQDAFLPFIEDGTVIFIGATTENPSFEINNALLSRARVYLIKRLQDDEIIKIVRQALAD
EVRGLGKRQLKIPDEVAKKLASLCDGDARKALNLIELMSDMLVDGGDFSEQMLIEVAGQQ
LAGFDKNGDQYYDLISAVHKSIRGSAPDAALYWYCRMLEGGCDPLYVARRLLAIASEDIG
NADPVAMSVAVNAWECFHRVGPAEGERAIAQAVVYLASAPKSNAVYTAFKAARQLARETG
SHAVPNHLRNAPTQLMADIGLGEGYRYAHDEPNGYASGECYFPEALANTRFYYPSEHGFE
KRIKTKLETLAEMDRLSEVKRYE
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
gtgtctagtttaactttcgacttcgcgcctgattttaggccgctcgcagccaggatgcgt
cctgagacccttgagcaatatatagggcaagatcacctattgggcgaaggtaagcctctg
cgtcaggcactcgaggcgggtagggcccactctatgatgttttgggggccaccaggcaca
ggcaaaaccaccttggccgagttggttgcccattacgccaatgcccatgtcgagcgcatt
tcagccgtcacctctggggtcaaagagatccgcgccgccatcgaacatgcaaaaaatgtc
gcccagtctcgggggcagagaaccctgctatttgtcgatgaagtgcatagatttaataag
agtcagcaagatgccttcttgccctttatcgaagatggtaccgtcatttttattggcgcc
accacggaaaacccctcgtttgagatcaataacgccttactttctcgcgccagagtctat
ctgatcaagcgcttgcaagatgatgagattattaagattgttcgccaagcgcttgctgat
gaggtgcgcggcttgggtaagcgtcagctgaagatacctgacgaggttgctaagaagctt
gccagcctgtgtgatggagatgcccgtaaggcacttaatctcatagagttgatgagtgac
atgcttgtcgatggcggcgattttagtgagcagatgctcatcgaggtcgcgggacagcag
ctagccggattcgataagaatggcgatcagtattacgatctgatctctgcagtgcacaag
tcgattcgtggctcggcgccagatgctgcgctttattggtattgccgcatgctagaaggg
ggctgtgacccactttatgtagcaagacgcttactggctattgcgtctgaagatatcggc
aacgccgatcccgtggccatgtcggtcgcggtaaacgcctgggaatgctttcaccgggtg
ggaccggccgaaggagagcgtgccattgctcaggcagtggtgtatctcgccagtgcccct
aagagcaacgccgtatataccgcatttaaggcggcgcgacaattagcaagagagacgggc
agtcacgcggtgcctaatcacctgcgcaacgcgcccactcagttaatggccgatatcggt
ttgggtgaagggtatcgctatgcacatgatgagcccaatgggtatgccagcggtgagtgt
tatttccctgaggcactcgcgaatacgcgcttttattatccgagcgaacatgggtttgag
aagcgaatcaaaaccaaactggaaacattggcagaaatggatcgcttaagtgaggttaag
cgctatgaataa
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