Shewanella marisflavi: CFF01_10005
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Entry
CFF01_10005 CDS
T05400
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
smav
Shewanella marisflavi
Pathway
smav03030
DNA replication
smav03430
Mismatch repair
smav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CFF01_10005
03430 Mismatch repair
CFF01_10005
03440 Homologous recombination
CFF01_10005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smav03032
]
CFF01_10005
03400 DNA repair and recombination proteins [BR:
smav03400
]
CFF01_10005
Enzymes [BR:
smav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CFF01_10005
DNA replication proteins [BR:
smav03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CFF01_10005
DNA repair and recombination proteins [BR:
smav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CFF01_10005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ASJ96883
UniProt:
A0AAC9TZR1
LinkDB
All DBs
Position
2292450..2293067
Genome browser
AA seq
205 aa
AA seq
DB search
MSAASSIVVLDFETTGLSPQQGDRAIEIGAVKLKQGVVVDRFQELMNPGFRISSFIEQYT
GISNQMLEQAPSVASVMSDFADFIDGSHLVAHNASFDQKFLAAELARINLEQSQPFACSL
LLARRLFQNSPNHQLGTLVSYLAIENDGVFHRALNDAEVTASLWLALNDEVINRWSCPAP
SFELMLALQRQPKQQLDQFMRRWQG
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccgcgtcatctatagtggtactggatttcgaaaccacaggtctctccccccaa
cagggcgatcgcgccatcgagataggtgcggtaaaactcaagcaaggagtcgtggtcgat
aggtttcaagagttgatgaatcccgggtttcgcatcagcagttttatcgaacaatatacc
gggatcagcaatcagatgttggagcaggcaccaagcgtggccagtgtcatgagcgacttt
gccgactttattgatggcagtcacctggtggctcacaatgccagtttcgatcagaaattt
ttggcggcagaacttgcccgcattaacctagagcaatcccaaccatttgcctgttcactc
ctgctggcaagacgcctgtttcaaaactcacccaaccatcagcttggcaccttagtcagt
tatctcgcgatcgaaaacgatggggtgtttcaccgcgccctcaatgatgccgaggtgaca
gcctcgttgtggctggcgctcaacgatgaggtcataaacagatggagttgccctgctccc
agttttgagctgatgctagcccttcagcgccaacctaaacaacaattagatcaatttatg
cgtaggtggcagggctaa
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