Shewanella marisflavi: CFF01_10220
Help
Entry
CFF01_10220 CDS
T05400
Name
(GenBank) murein L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
smav
Shewanella marisflavi
Brite
KEGG Orthology (KO) [BR:
smav00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smav01002
]
CFF01_10220
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
smav01011
]
CFF01_10220
Peptidases and inhibitors [BR:
smav01002
]
Cysteine peptidases
Family C82
CFF01_10220
Peptidoglycan biosynthesis and degradation proteins [BR:
smav01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
CFF01_10220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
ASJ96926
UniProt:
A0AAC9TZI5
LinkDB
All DBs
Position
complement(2334943..2336319)
Genome browser
AA seq
458 aa
AA seq
DB search
MVVRLLCILLLLGLPPQAFADERLAAANESLLNQLEVITLASGKSQFSAYRQQLSDEQPL
SPARIYSIAEAVSQFWHQQGIATGILPLTQNDPYAAVIASEPQVPDYLMLSNRVRYLLWL
AQHQPWGMISPQGWLKPGDTHGAISEIRGRLQALGDYPQGETGSYFYDALLEEAVLRFQA
RHGLKQDGIIGPATLRWLNRDPKARAQLLAYNFIRRAEFLANLGDRYLLINIPAYEMLLV
DDNRVALRSKVIVGKPYRQTPIISGEIKNLVLNPSWRVPRRLLTHDLLPKVREDGSYITS
RNFEVFDYQGDRVTKSDDEWADIAKGKFPYRLVQKPGVGNTLGRYKFFFPNEYSVYLHDT
SDKELFARSDRALSSGCIRVEKVEQLANWMASHLVRDKQTWVRMQIEREKTQWFAFDSGL
PIHLVYWTSWVDGNNIAQFREDIYKKNQNFSLDLQASK
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggttgttagactgctttgcatcttgcttttattaggtttgccacctcaagcttttgcc
gatgagcgccttgccgcggccaatgaatcactgctcaatcagcttgaggtgatcactttg
gcgagtggtaaaagccagttttcagcttatcgtcaacagctaagtgatgagcagccatta
tctcctgcacgtatttattccattgccgaagctgtctctcagttctggcatcaacaaggc
attgctacaggcattctgccactgacacaaaatgatccctatgcggcggttatcgccagt
gagcctcaagttcctgactatttgatgttaagtaatcgagtgcgctatctcttatggttg
gctcagcatcagccctgggggatgatctctcctcaaggttggttaaaacccggagacacc
catggagcgattagtgagattagaggccgtttacaggcgttaggcgactatcctcaaggg
gagactggttcgtacttttatgatgcattactcgaagaggcggtactgaggtttcaggcg
cgccatggcctaaagcaagatggcatcataggcccggcaaccttgagatggctaaatcgc
gatcccaaggcgcgcgcgcagctgttggcgtataattttattcgtcgcgccgaatttctg
gccaatcttggcgaccgttatctgctgatcaatatacccgcctacgagatgctactggtg
gatgacaacagagtggccttgcgctctaaggtgattgtcggcaaaccttatcgtcaaacg
cctattatcagcggtgagataaaaaacttggtgctcaaccccagttggcgggttccgcga
aggctgttaacccatgatcttttacctaaggtgcgtgaagatggcagttatatcaccagt
cgaaattttgaggtgtttgactatcagggggatcgggttaccaagtccgatgatgaatgg
gcggatattgccaaaggtaagtttccctatcgcttggtgcaaaagccaggtgtagggaat
acccttggacgttataagtttttctttcccaatgagtacagtgtttatctccacgatacg
tcagacaaggagctgttcgcccgcagcgatagggcgctgtcatcgggttgtatcagggtt
gagaaggttgagcaactggccaactggatggcgtctcatttagtgcgagataaacagacc
tgggtacggatgcagatagagcgcgaaaagacacagtggtttgcttttgactcgggtttg
cctatccaccttgtctattggacctcttgggttgatggaaacaacatcgcccaatttaga
gaagatatatataaaaagaatcagaattttagcctcgatctacaagcctcaaaatag
DBGET
integrated database retrieval system