Shewanella marisflavi: CFF01_11660
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Entry
CFF01_11660 CDS
T05400
Name
(GenBank) ATP-dependent helicase
KO
K19789
DNA repair protein RadD
Organism
smav
Shewanella marisflavi
Brite
KEGG Orthology (KO) [BR:
smav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smav03400
]
CFF01_11660
DNA repair and recombination proteins [BR:
smav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
CFF01_11660
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_30
AAA
AAA_16
SLFN-g3_helicase
AAA_22
Zn_ribbon_3
DUF7577
DZR
zf-tcix
TniB
SNF2-rel_dom
Zn_Ribbon_1
UPF0547
DZR_2
Motif
Other DBs
NCBI-ProteinID:
ASJ97192
UniProt:
A0AAC9XNR5
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All DBs
Position
2666190..2667929
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AA seq
579 aa
AA seq
DB search
MQLRDYQRQAVDAAINHFKRSDESALLVLPTGAGKSIVIAELARIAKGRTLVLTHVKELV
AQNAEKVGLLTDEASIFSAGLKQKSTRNKTVLASIQSAVRNPEQFNQPYSLVIIDECHRV
SNEKESQYQQLLNHLKAQNPKLRLLGLTATPYRLGSGWIYRYHYHGKVGNTEQPVFEHCI
FELPMRPLIKQGFLTPPKVLDGLSAQYDFSELSPSANGEYSETEVDSLLNHAGRATKAIV
EQIRQLTNTRAGTIIFAATVRHAQEIMTLLDSPQAGLITADTPSQERDAIIDAFKRRELS
YLVNVAVLTTGFDAPHVDLIAILRPTASVSLFQQMVGRGLRICEGKRDCLVIDYAANGFD
LFFPEVGRPKPDSKSVPVQVPCPVCGFANIFWGLVDNDGDIIEHFGRRCQATVAGPDGKQ
QCDFRFRAKACPECGEENDIAAKVCQHCQSTLIDPDKRLKEVLQQKHHHLFRCQEMLFEV
DNDRLKVRYLDIEGNDFSCYFNFATKAQIRAFYGVFVHQHTRTPGQKQPSFNKPEQVVAA
RELFRIPDLLLLKKGKRGWELVERFFDYRGRFDSQHKFV
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
ttgcaacttagagactaccaacgccaggccgtcgacgccgccatcaatcattttaagcgc
agcgatgagtcagccctcctggtactcccgaccggtgcagggaagagtatcgtcatcgcc
gaattggctcgcattgccaaggggcgcaccctagtgcttacccatgtcaaagaactggta
gcgcaaaatgccgagaaggttggtttactgaccgacgaggccagtatcttttccgctggc
cttaaacagaaatccacccgcaacaagacagtgctcgccagcatccaatcggcagtgcgt
aatcccgagcagtttaaccaaccctactctttagtgatcatcgacgaatgccaccgcgtc
tccaacgagaaagagagccagtatcagcaacttcttaaccatctcaaggcacagaacccg
aaactcaggttattaggtctaacggctaccccctatcgtcttggcagtggttggatctac
cgctatcactatcatggcaaagtcgggaatactgagcagccagtgtttgaacactgcatt
tttgaactgccgatgcgcccgctcattaagcaggggtttctgacgccccccaaggtgctt
gacggcctatcagcccagtatgactttagtgagctctcacccagtgccaatggcgaatat
agcgagaccgaagttgactccctgctaaaccacgccggacgcgccacaaaggcgattgtg
gaacagataaggcaactgaccaacacccgagcaggcactatcatcttcgcggcgaccgtg
cgtcatgcgcaggagatcatgacgctgctcgacagcccccaggcagggcttatcacagcc
gatacgccaagccaggagcgcgatgccatcatcgacgcctttaaacgtcgggaactcagc
tatctggtcaatgtggccgtactgaccacaggctttgacgccccccatgtggaccttatc
gccatcttaagacccacggcttcagtgagcctgttccagcagatggttggtcggggccta
aggatctgtgaaggcaagcgggactgcttagtgatcgactatgccgccaatggcttcgac
ctcttcttccccgaagtagggcgtcccaagcccgacagtaagagcgtgccggtacaggtt
ccctgccctgtctgcggctttgcaaacatcttctggggactggtagataatgatggcgat
atcatcgaacattttggccggcgctgtcaggcaacagttgcagggcctgatggcaagcag
cagtgcgacttccgttttcgcgctaaggcttgccctgaatgcggtgaagaaaatgatatt
gccgctaaggtatgtcagcactgccagtcgacattaattgacccagataagcgccttaaa
gaggtactgcaacagaaacatcatcatctgttccgatgccaggaaatgcttttcgaggtc
gataacgaccgactcaaggtgcgttacctggatatcgagggtaacgatttctcctgttat
tttaattttgctaccaaggcacaaattcgggctttttacggcgtatttgtgcatcaacat
acacgcactccaggccagaaacagccctcatttaacaagccagagcaggtagtcgccgcg
cgggagcttttccgaataccggatcttttgttgttgaaaaaaggtaagcgaggctgggag
ttggttgagcgtttcttcgactatcgtgggcgattcgacagccagcataagtttgtatga
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