KEGG   Shewanella marisflavi: CFF01_12240
Entry
CFF01_12240       CDS       T05400                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
smav  Shewanella marisflavi
Pathway
smav02020  Two-component system
Brite
KEGG Orthology (KO) [BR:smav00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CFF01_12240
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:smav02022]
    CFF01_12240
Two-component system [BR:smav02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   CFF01_12240
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_5 HTH_8 AAA_2 HTH_50 AAA_16 AAA_3 Mg_chelatase AAA_7 AAA ATPase
Other DBs
NCBI-ProteinID: ASJ97282
UniProt: A0AAC9XNU4
LinkDB
Position
2767428..2768795
AA seq 455 aa
MQNQIFNQYDILIVDDEPLIGSALVQLFELESYRALSLTDAKQIGQGLPDNWPGIVISDV
NMPDTDGLALMRTLLSQDKDIPIILLTGHGDIAMAVQALKQGAYDFIEKPFNNEHMLDIA
KRALEKRALTLENRSLKRELESQSTPGPRILGHSPGIKQMRHIIHQVIDMPADVLIEGET
GTGKELVARYLHDHSPRSEANFVAINCGAIPETIIESELFGAESGAFTGADKTRIGKFEY
ANGGTLFLDEIESTPLSLQVKLLRVLEDRKVERLGSNKSIDLDIRIIAATKVDLKTLCDT
GEFRQDLLYRLNLVTVPIPALRERREDIGLLFLHFARIASARYHKALIPLTAEYTAQLVS
HDWPGNVRELRNLAERYVLLGPEAAFATSLGQSNQLNANMSLQQRVEFFERLLIEEALSN
NKGSIKLTMEQLELPRKTLYDKMQKFGLSRKTFLS
NT seq 1368 nt   +upstreamnt  +downstreamnt
atgcaaaatcaaatttttaatcaatacgatatccttatcgtcgacgacgagcccttgata
ggctcggccctggtacagctgtttgaattagaatcctaccgcgccctctccttaaccgac
gccaagcagattggtcagggactaccagataactggcccggcatagtgatctcagatgtg
aacatgcccgataccgatggcctcgccttgatgcgcactctgctttcccaggacaaagat
atccctatcatcttgctgactggtcacggtgacatcgccatggcggtacaggcgctcaaa
caaggtgcctacgattttattgagaaaccttttaacaacgagcatatgctggatatcgcc
aagcgcgccctggaaaaacgcgcgctgacgctggaaaaccgcagcctgaagcgggagctt
gaatcccaaagcaccccaggaccgcgtatcttgggccatagtccggggatcaagcagatg
cgccacatcatacatcaggtgatcgacatgcccgccgatgtattgattgagggtgaaaca
ggcacaggcaaagagctggttgcccgttatctgcacgatcacagccctcgcagtgaggcc
aactttgttgccatcaactgcggcgctattcctgaaaccatcatcgagagcgagctgttt
ggcgccgaatcaggcgctttcaccggcgccgataagacccgcatcggcaagttcgagtat
gccaacggcggcacactgtttctcgatgagattgagagcacccccttgtccttgcaggtc
aaactgctgagggtattggaagacaggaaggtggagcgccttggctccaacaaaagcata
gatttggatattcgcatcatagctgcgactaaggtagacctgaaaaccttgtgcgatacc
ggtgagtttcgccaagatcttctttaccgtcttaacctggtgacagtgccaatcccggcc
cttagggagcgacgtgaggatatcggattactgtttctgcactttgcccgcattgcctcg
gcgcgctaccacaaggcactgatccccctcactgcggaatacacggctcagctggtctcc
cacgactggcccggtaatgtacgcgaactgcgtaacctggccgagcgctatgtgttactc
ggcccagaagcggcctttgccacctcgctgggtcaaagcaatcagctcaatgccaatatg
tcactacaacagcgggtagagttttttgagcgattattgattgaagaagcgctgagtaac
aacaagggcagcatcaagctcaccatggagcagctcgaactgccgcgcaaaacgctttat
gacaagatgcaaaaattcggtctcagccgaaagacctttctaagctaa

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