Shewanella marisflavi: CFF01_12965
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Entry
CFF01_12965 CDS
T05400
Name
(GenBank) lytic transglycosylase F
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
smav
Shewanella marisflavi
Brite
KEGG Orthology (KO) [BR:
smav00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
smav01011
]
CFF01_12965
Enzymes [BR:
smav01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
CFF01_12965
Peptidoglycan biosynthesis and degradation proteins [BR:
smav01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
CFF01_12965
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SLT
SBP_bac_3
Lysozyme_like
Motif
Other DBs
NCBI-ProteinID:
ASJ97419
UniProt:
A0AAC9XP34
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All DBs
Position
2926935..2928365
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AA seq
476 aa
AA seq
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MRVFLLILFCVSLLTGCQGERVDAAKVSTPAPKTQLNVGTLYGAQIYVTTGQGVAGFDYE
MAERFANHQGLELNMRPYSTIGELYRAMQADEIDLIAAGLGDTQSRREQFRLGPPLYYVN
QVLVYKQGVKYPTDISQLDDNITVISDSSFIETLADLQKLYPELVWDQHGDKDSEELLAM
IARDEISYTIADSTTFEINRRYMPELRAGPVLREEQAVVWLLPPTGSDQLMSDLLSFWHQ
EKRAGTLAHLNEKYFAHVKRFDYVDTRAFLRAIDTKLPKYRDDFVHYAGDLDWRKLAATA
YQESHWNPNARSPTGVRGLMMLTLPTAKQMGIDNRLDPEQSIRGGAKYLSDILNRLPESI
PENQRMWFALASYNIGYGHVEDARKLAQSMGLNPSAWRDLKKVLPLLQKRKYYKHTRYGY
ARGSEAVHYVDNIRRYYDTLVWIDNQHQELQDDIMEAQQQTAEKQSQSEISGAQPE
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgagagttttcctgctgattctattctgtgtttcgctactgactggctgtcagggcgag
cgcgtggacgcagcaaaagtctctacgcctgcaccgaaaacgcaacttaatgtcggcacc
ctctatggcgcgcagatctatgtcaccacgggtcagggcgtagccggcttcgactatgag
atggctgagcgatttgccaaccatcaggggcttgagctcaacatgcggccctactccacc
ataggtgagctctaccgcgccatgcaagcagatgagatagatcttatcgccgcggggctg
ggcgatacccaaagccgacgcgaacagtttagactcggtccaccgctctattatgttaat
caggtattggtctacaagcagggggtaaaataccctacagatatcagccagcttgatgac
aacattacggtgatctctgactcctcctttatcgagacgctggcggatctgcaaaagctc
taccctgagctggtgtgggatcagcatggcgacaaagacagcgaagagctgctggcgatg
atcgcccgtgatgagatcagctataccatcgccgactcaaccacctttgagatcaatcgc
cgctacatgcctgagcttagagccggccctgtgctaagagaggaacaggcggtagtctgg
ctgttaccgcccacaggtagcgatcaactgatgagcgatctgctgagcttctggcatcaa
gagaaacgcgccggcactctggctcacctcaatgagaaatatttcgcccatgtgaagcgc
ttcgattatgtcgatacccgcgccttcctgcgcgccatagatactaagctgcccaaatat
cgcgacgactttgtccattatgctggcgatctcgactggcgcaagctggcagcgaccgcc
tatcaggaatcccactggaatcccaatgcccgctcgccgaccggggtacgcggcctgatg
atgctcaccctgccgacagcaaaacagatggggatcgataaccgtctcgaccctgagcag
agtatccgcggcggcgctaaatacttaagcgacatcctcaatcgcctgccggaatcgatc
ccggaaaaccagcggatgtggtttgccttggcgtcatacaacataggctatggtcatgta
gaagatgctcgcaagctggcgcagtctatgggacttaaccccagtgcctggcgggacctg
aaaaaggttctgcccctgctacagaagcgtaaatattacaaacatacccgctatggctat
gccagaggcagcgaggcagtgcattatgtggataacatcagacgttattacgacacccta
gtgtggattgacaaccagcatcaggaattacaagatgacataatggaagcgcaacaacaa
acggccgaaaagcaatcacaaagcgagatttccggagcacagcccgagtaa
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