Shewanella marisflavi: CFF01_13325
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Entry
CFF01_13325 CDS
T05400
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
smav
Shewanella marisflavi
Pathway
smav03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CFF01_13325 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smav03400
]
CFF01_13325 (mutS)
DNA repair and recombination proteins [BR:
smav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
CFF01_13325 (mutS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Motif
Other DBs
NCBI-ProteinID:
ASJ97476
UniProt:
A0AAC9XNY7
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Position
2999159..3001726
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AA seq
855 aa
AA seq
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MNAVDTQHLEKHTPMMRQYLTLKAETPDMLLFYRMGDFYELFYDDAKRASELLGISLTAR
GKSGGDPIPMAGIPYHAVEGYLAKLVQLRVSVAICEQIGDPATTKGPVERKIVRIVTPGT
LTDEALLQERQDNLLAAVYHGKVGFGYATLDVSSGRFVVTELASREALEAELQRTNPAEL
LYSEDFNELSLINSLSGKRRRPEWEFDYDTSYKLLLEQFGTKDLYGFGLGEVRLSLQAAG
CLIQYVKDTQRTALPHINAITRFNQCDSIVLDAATRKNLELTRNLQGGSENTLASVLDNT
ATPMGSRMLQRWIHEPLRNHNIINARHDAIDELLNNGFHEPLHEQLKALGDIERITARLA
IRSARPRDFARLRQALTLLPDIQQTLSQCHSAHLSTLSQSMGEFPQEHALLSRAIVDNPP
MLIRDGGVIKEGYHAELDEWRKLSQGATDYLAELEAREKAATGASTLKVGYNRVHGYYIE
VSRRESDLVPMSYQRRQTLKNTERYIVAELKEHEEKVLSSQGKALALEKQLWEELFDLLM
PRLHELQEFARAAAELDVITNFAERAEQLDYHRPELTAQSGIYIEAGRHPVVERVSQSPF
IANPVSLNPARRMLIVTGPNMGGKSTYMRQVALITLMAHIGSFVPAQKAAIGPVDRIFTR
IGAADDLASGRSTFMVEMTETANILHNATPESLVLMDEIGRGTSTYDGLSLAWSAAEHLA
QSLRSMTLFATHYFELTQLPEQIENVANVHLDAIEHDDTIAFMHAVQEGAASKSYGLQVA
ALAGVPAKVVQAAKHKLHHLESRDREEGLPELRQAQLSLAMPESSKALDRLDTIDPDSLT
PRQALDLLYELKQLR
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgtcgatactcaacaccttgaaaagcacacccctatgatgcgtcaatacctg
acgttgaaagccgaaacgcctgatatgctgcttttttatcgtatgggagatttttacgag
ctattttatgacgatgcaaagcgtgcatctgagctgttagggatctccctcacagcccgg
ggcaagagcggcggcgatcccatccctatggcgggcattccctaccacgcagtggagggc
tatctggctaagctggtgcaattaagagtctctgtggctatctgcgaacagataggcgat
ccggcaaccaccaaggggccggtggagcgaaaaattgttcgcatcgtcactcccggcact
ttgaccgatgaagccctacttcaggaacggcaagataacctgttagcggccgtttaccac
gggaaagtgggctttggctacgcgacgctagacgtctcctcgggtagattcgtcgtgaca
gaactcgctagtcgcgaggcactggaagcggagttgcagcgtactaatcccgccgagctc
ctctatagcgaagattttaacgaactgagcctgattaactccctgtccggcaaacgccgc
cgtccagagtgggagttcgattatgacaccagctacaagttactgctcgaacagttcggt
accaaagatctgtacggttttggcctgggagaagtgcgcctgtcgctgcaggcggcgggc
tgccttatccaatatgtcaaagatacccagcgcaccgccctgccccatatcaatgcgatc
acccgttttaaccagtgtgacagcatagtactcgatgccgcgactcgtaagaatctcgag
cttactcgtaaccttcaagggggcagtgaaaacacactcgcttcggtacttgataacacg
gcgacacctatgggaagtcgcatgttacaaaggtggatccatgaaccactgcgtaaccac
aacatcatcaatgcccgccacgatgctatcgacgagctgttaaacaatggctttcatgag
ccgctacacgaacaattaaaagcccttggcgacattgaacgcattacggcacgtctggca
atacgcagtgctcggccaagagatttcgcccgtctgcgccaggcattaaccctattacct
gacattcaacagacactgagccaatgtcacagcgctcacctaagcacgctatcgcagtca
atgggtgagttcccacaagaacatgccctgctcagccgcgctatcgtcgacaatccccca
atgctgatccgcgatggcggcgtgatcaaagagggctaccatgccgagctggatgagtgg
cgcaaactcagccaaggggcgaccgattaccttgccgaactcgaagcccgtgagaaagcc
gccaccggcgcctccaccttaaaagtgggctataaccgagtgcacggttactatatcgag
gtgagtcggcgcgagtccgatctcgtcccaatgagttatcaacgcagacaaactcttaaa
aataccgagcgttatatcgttgccgagcttaaagagcatgaagaaaaagtgctctccagc
caaggtaaggcgctggcgctcgagaaacagctgtgggaagaactgtttgacctgctgatg
cctcgcctgcatgagttgcaagagtttgctcgggcggcggcagaactggatgtgatcact
aactttgccgagcgcgcagagcagcttgactatcacaggcccgaactgacggcccagagc
ggcatttatatcgaggcagggaggcaccctgtggtcgagcgcgtcagtcaaagcccgttt
atcgctaacccagtgtcacttaatcccgcaagacgcatgctaattgtcaccggccccaac
atgggcggtaaatcaacctatatgcgccaggtcgccctgatcaccttaatggcgcacatc
ggcagctttgtgccggcacaaaaggccgcgatagggccggtcgatcgcatctttacccgt
atcggtgccgccgacgatctcgcctcggggcgctcaaccttcatggtggagatgactgaa
accgccaacatactccacaatgccacgccagaaagcttagtgctcatggatgaaattggc
cgcggcacctcaacctatgatggcttatcgctcgcttggtcggctgccgagcatctggcg
caaagcctcaggtcgatgacattgttcgccacccactatttcgagctaactcagctaccc
gaacaaatcgagaatgtggccaacgtacatctagatgccatagaacatgacgataccatc
gcctttatgcatgcagtacaagagggagcggcaagcaaaagctatggcctacaggtcgcc
gcgctggctggcgtgcccgccaaggtcgtgcaagcagccaagcataagctacatcacttg
gaaagccgagacagagaagagggattgcccgagttaagacaagcacagctaagcctcgcc
atgcctgaatcttcaaaagcactggacagattagacactatcgatcctgatagtctcacc
cccagacaggcgcttgatctcctttatgagctaaaacaacttcgttaa
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