Shewanella marisflavi: CFF01_13470
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Entry
CFF01_13470 CDS
T05400
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
smav
Shewanella marisflavi
Pathway
smav00260
Glycine, serine and threonine metabolism
smav00460
Cyanoamino acid metabolism
smav00630
Glyoxylate and dicarboxylate metabolism
smav00670
One carbon pool by folate
smav00680
Methane metabolism
smav01100
Metabolic pathways
smav01110
Biosynthesis of secondary metabolites
smav01120
Microbial metabolism in diverse environments
smav01200
Carbon metabolism
smav01230
Biosynthesis of amino acids
smav01240
Biosynthesis of cofactors
smav04981
Folate transport and metabolism
Module
smav_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
smav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CFF01_13470 (glyA)
09102 Energy metabolism
00680 Methane metabolism
CFF01_13470 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CFF01_13470 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
CFF01_13470 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CFF01_13470 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
CFF01_13470 (glyA)
Enzymes [BR:
smav01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
CFF01_13470 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
ASJ97503
UniProt:
A0AAC9U189
LinkDB
All DBs
Position
complement(3030641..3031894)
Genome browser
AA seq
417 aa
AA seq
DB search
MLKKEMNIADFDPQLFQAIQEETRRQEEHIELIASENYTSPRVMEAQGSQLTNKYAEGYP
GKRYYGGCEHVDIVENLAIERAKELFGATYANVQPHSGSQANSAVYMALLQPGDTVLGMN
LAHGGHLTHGSPVNFSGKLYNIVPYGIDESGKIDYDEMERLALEHKPKMMIGGFSAYSGI
VDWARMREIADKIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTSTTHKTLAGPRGGIIL
SAANDEDLYKKLNSAVFPGGQGGPLMHVIAGKAVAFKEALSPEFKEYQQQVVVNAKAMAN
TFIERGFDVVSGGTENHLFLLDLIAKDITGKDADAALGRANITVNKNSVPNDPRSPFVTS
GLRIGSPAITRRGFKEAEAVELTNWICDILDDISNEATIERVKNQVLELCAKYPVYG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaaaagagatgaacatcgctgactttgatccgcaactgtttcaagcgatccag
gaagagactcgtcgtcaagaagagcacatcgagcttatcgcttcggagaactacacttct
cctcgcgtgatggaggctcaaggttctcagctgaccaacaagtacgccgaaggctatcct
ggcaagcgttactatggcggttgtgagcatgttgacatcgttgaaaacctggccatcgaa
cgtgccaaggaactgtttggcgcgacatacgccaacgttcagcctcactccggctcacaa
gccaacagcgcagtttacatggcgctactgcaaccaggcgataccgtactgggtatgaac
ctagctcacggtggtcacctgactcacggctctccagttaacttctctggtaagctatac
aacatcgttccttacggtatcgacgagtctggcaagatagactacgacgagatggagcgt
ctggcccttgagcacaagcctaagatgatgattggtggtttctctgcctattctggtatc
gtcgattgggcacgtatgcgtgaaatcgccgacaagattggtgcttacctgtttgtcgat
atggcccacgttgctggcctgatcgccgccggtgtttatccaaacccagtgccacatgca
cacgtggtaacttctactacccataagaccctagccggtcctcgcggcggtatcattttg
tctgcggcgaatgatgaagacctttacaagaagctgaactctgcggtattccctggtggt
cagggtggcccattgatgcacgttatcgccggtaaggcggtagcctttaaggaagcgctg
tctcctgagttcaaggaatatcaacagcaagtggttgtgaacgctaaggcgatggctaac
acatttatcgagcgtggtttcgatgtggtatctggcggcacagaaaaccacttgttcctg
ctggatctgatcgctaaagatatcacaggtaaagatgctgatgcggcgctgggccgtgcc
aacatcacggtaaacaagaactcagtacctaatgacccacgctcaccttttgtgacttca
ggtctgcgtatcggttctccagccatcactcgtcgcggcttcaaagaagctgaagcggtt
gagctgactaactggatctgtgacattctcgatgacatcagcaatgaagccactatcgag
cgcgtgaagaaccaggtgcttgaattgtgcgctaagtaccctgtttacggttaa
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