Shewanella marisflavi: CFF01_13545
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Entry
CFF01_13545 CDS
T05400
Symbol
glgX
Name
(GenBank) glycogen debranching enzyme GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
smav
Shewanella marisflavi
Pathway
smav00500
Starch and sucrose metabolism
smav01100
Metabolic pathways
smav01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
smav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
CFF01_13545 (glgX)
Enzymes [BR:
smav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
CFF01_13545 (glgX)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
Motif
Other DBs
NCBI-ProteinID:
ASJ97518
LinkDB
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Position
complement(3052652..3054832)
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AA seq
726 aa
AA seq
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MRLTQGKPYPLGATLDSDGVNFALFSAHASAVYLCLFDEEETEIARFRLERQTQQIWHGH
VSELKAGCRYGYRVDGPYQPLIGHRFNVNKLLLDPYAKQLSGPIIDHKSHYGYQFGHELE
DLSFCELDNAAEMPKCVVVDLEGLAPIAPLMNPGEQRESPLSLRRGVIYELHVKGFSQQN
PEVPEENRGRFAGLGDPASIGYLNHLGITAVELLPVQQFVSEAFLQQKGLTNYWGYNSIG
FFAPHHGYLSSTAAAGGQHGSAGINEFRDMVSALHRAGIEVILDVVYNHSAEGNRLGPTY
SFKGIDNLSYYRLHPSEPRYYINDTGCGNTLNLSHPRVLQLVMDSLRYWVEVMGVDGFRF
DLATTLGREEHGFDVGSGFFDAIGQDPVLSQVRLIAEPWDIGPGGYQLGQFPIGWSEWND
RYRDTVRRFWRGDAGMLPEFATRFHGSSDLFEHAGRKPAASINFITSHDGFTLMDLVSYR
HKHNQANGEQNRDGHNENYSHNYGHEGQSDEVELKSLRARQCRNMLTTLFMSQGVPMLLA
GDEVGHSQHGNNNAYCQDNPSSWLDWRKDIASDELLSFTMNLIKLRRRFPMLCHRDYIHE
SANFASPGLDWFCRQGEPMTKAHWGEAQTRTLSLVISGELEAQTGCRQALLLMFNADDRP
QQFTLPSLEGIVQWQCLLSTQDCPQDGKATNRQGLLQGASLVLQDRSLMIYYAQFTSAPQ
ATGESR
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgcgactgacccaaggcaagccctatcccttaggagccaccttggacagtgacggggtt
aacttcgcgttgttttcggcccatgccagcgccgtctatctttgtctgtttgatgaggaa
gagactgagatagcccgttttcgtctggagcgccagactcagcagatctggcatggccat
gtgtctgagctgaaggcgggctgccgttatggctatcgggtcgatggtccctatcagcca
cttattggtcatagatttaacgtcaacaagctgctgctcgacccctatgccaagcagttg
tcggggccgatcattgaccacaaatctcactatggttatcagtttggtcatgagctggag
gatttaagcttctgcgagctggataacgccgctgagatgcccaaatgtgtggtggttgac
cttgagggcttagcgcctattgcgccgctaatgaatcccggtgagcagcgagagagcccg
ctgtcgcttagacgcggcgtgatctatgagttgcatgtcaaaggttttagtcagcaaaac
ccagaggtgccagaggaaaacagaggtcgttttgccggccttggggatccggccagtatt
ggctatctcaatcaccttgggatcacggcggtggagctgttacctgtgcagcagtttgtc
tctgaggctttcttgcagcagaagggactgactaactactggggctataacagcataggt
tttttcgcgccccatcatggctatctcagcagtaccgcagcagcgggtggccagcatggc
agcgccgggatcaatgagtttcgtgacatggtcagcgccctgcaccgcgccggtatcgag
gtgatactggatgtggtctacaaccatagcgccgagggcaaccgcctggggccaacctat
agctttaaggggatcgataacctcagctattaccgtttgcatccgagtgagccacgctac
tacatcaatgataccggttgtggtaacaccctgaatctgtcccatcccagagtattgcag
ctggtgatggactcgctgcgttattgggttgaggtgatgggggtcgacggctttaggttc
gatctggccaccaccttaggccgtgaagaacatgggttcgatgttggctctggttttttc
gatgccataggtcaagacccagtgctcagccaggtgcggctgattgctgagccttgggat
atcggccccggaggctatcagctgggacagttccccattggctggagcgaatggaacgac
aggtatcgcgatacggtgcgtcgtttctggcgtggcgatgccggcatgttgcccgagttt
gcgactcgctttcacggctccagtgacctgtttgaacatgcggggcgcaaacccgctgcc
agcatcaattttatcaccagccacgacggctttaccctgatggatctggtgagctatcgc
cataagcataaccaggccaatggtgagcagaaccgcgacgggcacaacgaaaactatagc
cacaactatggccatgaagggcagagcgatgaggtggagcttaagtcactgagggcccgt
cagtgtcgcaacatgctcaccacactctttatgtctcaaggggtgcccatgctgctggcc
ggtgacgaggtgggccatagtcagcacggcaataacaacgcctattgtcaggataacccc
agtagttggctcgactggcgcaaggatatcgccagcgatgaactgctgagcttcaccatg
aatctgatcaagttgcgccgccgtttccccatgctctgccacagagactatatccacgag
agcgccaattttgcctcaccaggtctcgactggttctgccgccagggagagcccatgact
aaggcgcactggggcgaggcacagacccgtaccctgagcctggtgatcagcggcgagctg
gaggcgcagaccggttgccgtcaggcgttactcttgatgttcaatgccgacgacagacca
cagcagttcaccctgccaagtcttgaggggatagtgcagtggcaatgcctgctcagcacc
caggactgtcctcaagatggcaaggccactaacaggcagggcttgttgcagggggccagc
ctggtcttgcaagacagaagcctgatgatctattacgcgcaatttacttcagcgccacaa
gcgacaggagagtctagatga
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