Shewanella marisflavi: CFF01_14950
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Entry
CFF01_14950 CDS
T05400
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
smav
Shewanella marisflavi
Brite
KEGG Orthology (KO) [BR:
smav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smav03009
]
CFF01_14950
Enzymes [BR:
smav01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
CFF01_14950
Ribosome biogenesis [BR:
smav03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
CFF01_14950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ASJ97776
UniProt:
A0AAC9XP81
LinkDB
All DBs
Position
complement(3396308..3397018)
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AA seq
236 aa
AA seq
DB search
MSAKRARLDRFISQQCQIPRKQVRLLLAKGRVSVDGFVVRDADWQIDQFSVVMLDGEVLR
QEQAIYLMLHKPVGVVSATKDTQHKTVMDLLPAYQDKGLHIVGRLDLNTSGLVLLTNDSR
WSKQIMSPEHKVAKQYLVGLKAPLTQAYVKAFAEGFYFAYENITTQPAELEILDSHLARV
SLLEGRYHQIKRMFGRFRNQVMTLHRFAVGNIHLDESLEPGEFRALTDEEVASISQ
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctaaacgtgcccggttagacagatttatcagccagcaatgtcagatcccgcgc
aagcaggtgcggctcctgttggcgaaaggccgggtgagtgtcgatgggtttgtggtgaga
gatgccgactggcagatagatcagttttcggtggttatgctcgatggtgaagtgctcaga
caggagcaggccatctacctgatgttacataaacccgtgggtgtggtgagtgcgactaag
gatacccagcacaagacagtgatggatctcttgcctgcatatcaggacaaggggctgcat
atcgtcgggcgtctggatcttaacacctcgggcctggtgctgctcaccaacgacagccgt
tggtcgaaacagatcatgtctcccgagcataaggtggcgaagcagtatctggttggcctg
aaggctccgctgactcaggcttatgtgaaagccttcgccgaaggattttattttgcctat
gaaaatattaccactcagcctgcagagctggagatcctcgatagccaccttgcgcgggtt
agcttgctagagggacgctatcatcagatcaagcgtatgtttggccgattccgtaatcag
gtcatgacattgcaccgattcgccgtgggcaatattcacctggatgagtcacttgaacct
ggtgagttccgagcgctaacggacgaagaggtagctagtatatcccagtga
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