Shewanella marisflavi: CFF01_16400
Help
Entry
CFF01_16400 CDS
T05400
Name
(GenBank) diguanylate cyclase
KO
K20962
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
smav
Shewanella marisflavi
Brite
Enzymes [BR:
smav01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
CFF01_16400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAF_2
Exo84_C
Motif
Other DBs
NCBI-ProteinID:
ASJ98043
UniProt:
A0AAC9U2K1
LinkDB
All DBs
Position
3721906..3723846
Genome browser
AA seq
646 aa
AA seq
DB search
MPYQDAFSLLEQDPLFSQTQVNTAQLGVPDEMFNGWQQTLDLLSEIVDTPAILIMRVTDK
DISVFTSSQHPDNPYKRHDTEGLGHGLYCETVIKNQSELVVPNALKDKEWDSNPDIKLGM
IAYCGLPLTWPNGHPFGTLCMLDNHERDYGRTFRHLLARFQNAINANLASLYQSAKLLHL
NQILETKVQERTLELTKLSKKLLSEIEHRTAIENSLQFHKDHDPLTGLANRLGFINQLSQ
QLSQADELNTYVIYFGLRNFKSINESYGYVIGDKVLQLFSQRIKGILHKDNLFARIAGAE
FVIAHRGTNPLELPLINSIIQTANIPFALANFSINIPCCIGVAIAPTDAQDAAELMQKAG
AAMSISKSDGTPYSFFNKLTQTNIERRCLLESHLVDALKNQELSLHYQPLFSLQHQGVIG
AEVLLRWHSPLLGDVPPDQFISLAENNGQIIAIGNFVLHTAIEQAAQWLCRDPSQQFRVA
INISPLQFRDVDFADYIANLLSLYQLPPSSLELEITEGVLLQDEQLAKHIIDRLQTLGVK
ISLDDFGTGYSSLSYLQKYSFDTLKIDRCFITNLEKNEQDRELTRAIIAMGKKLTLNVIA
EGVETQAQDDFIRQEECDFGQGYLYGKPTDAISFERCYLTNKQIDG
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgccctaccaagacgctttctcattgctggagcaagaccctctcttcagtcaaactcag
gtaaacacggcccagcttggcgtgccggatgagatgtttaatggctggcagcaaacccta
gatcttttatcggaaatcgtcgatacgccggccatcttaatcatgcgggtgacagataaa
gacatttcggtctttaccagcagccagcatccggacaatccctataaacgccatgataca
gagggtctgggccatggtctctactgtgaaaccgttatcaaaaatcaatccgagctggta
gtgcccaatgccttaaaagataaagagtgggatagcaatccagatatcaaactgggaatg
atcgcatattgtggcctaccgctaacctggcccaacggccatccctttggcaccctctgc
atgctggataatcatgagagagactacgggcggacctttcgtcatctgttggcacgtttt
caaaatgccatcaacgccaatctcgccagtctgtatcagagcgccaaactgcttcacctc
aaccagatcttagaaaccaaggtacaagagcgaacacttgagctaaccaaactcagtaaa
aagttattgagcgaaatagagcatcgcaccgccattgaaaattcactgcaatttcataaa
gatcacgatccattaaccggcttggccaatcgacttggcttcattaatcaactgtcgcaa
cagctcagccaagccgacgaactaaacacctatgtgatctactttggcctacgtaacttt
aagtcaatcaatgaaagctatggctacgtcattggggacaaggtactgcagctctttagt
cagcgcattaagggcattttgcacaaagacaacctgtttgcccgtattgctggcgccgaa
tttgtcattgcccacagaggcacaaatccactagagcttccgttaattaacagcatcata
cagaccgccaacatcccctttgctctggccaatttcagcatcaatattccctgctgcata
ggggtagcaatagcaccgaccgacgcacaggatgcggccgagctaatgcaaaaagcgggg
gcagccatgagcatcagtaagagtgacggcacgccctatagcttctttaacaagttgact
cagaccaatatcgaacgccgttgcctgttggaatctcacttggtcgacgccctaaaaaat
caggagcttagtctgcactatcaaccgctattcagtctgcagcaccaaggtgtgatcggc
gccgaggtcctacttagatggcacagcccactgctgggcgacgtaccaccggaccaattt
atcagcctggcagaaaacaatggccagatcattgccataggtaactttgtcctgcatacc
gccatcgaacaggctgcccaatggctttgccgtgatcccagccagcaatttcgcgtagca
ataaacatctcaccactgcagtttcgcgacgtcgattttgccgactacatcgccaatctg
ttaagcctgtatcaactgccgccctcctccctagaactggaaattaccgagggcgtctta
ctgcaagatgagcagctggccaaacatatcatcgaccgcctacaaactttgggcgtcaag
atctctctagacgactttggcaccggctactcctccctgagctatctacaaaaatactcc
ttcgacactctcaagatagatcgctgttttattacaaacctggagaagaacgagcaagac
agagaactgacacgagcgatcatcgccatgggtaagaagctgacgctcaatgtgatcgcc
gagggagttgagacccaggctcaggatgattttattcgtcaggaagagtgcgatttcggt
caaggctacctctatggtaaacccactgatgcgataagctttgagcgctgctacctaacg
aacaaacagatagacggctaa
DBGET
integrated database retrieval system
