Shewanella marisflavi: CFF01_16450
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Entry
CFF01_16450 CDS
T05400
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
smav
Shewanella marisflavi
Brite
KEGG Orthology (KO) [BR:
smav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smav02000
]
CFF01_16450
Transporters [BR:
smav02000
]
Other transporters
Pores ion channels [TC:
1
]
CFF01_16450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ASJ98053
UniProt:
A0AAC9U274
LinkDB
All DBs
Position
3732549..3734606
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AA seq
685 aa
AA seq
DB search
MALRFSYLTLSIGAALLTLPFVQAQEAAFEVIKVYGAHQDNFTSVTPEAQAPVSDISGLL
SKLPGTAVNGNGPLTGIAQYRGLFGDRVNTQINGVSLAGAGPNAMDTPLSYASLINSERV
EMHRGIAPVSAGTNTLGGSIKVIESQATFNDTQGRIAGQYQGNGAQSHLGAKVNVGGEQH
ALLIYGDLMHGDKDLKSGSGLHISPSGYDKQMVGGQYRFNLSDKGLDAESIAIGYQHLET
TEAGTPALPMDIDFIRTDRVKLEGEHNLDSWGLNWHLAYSDARHGMDNFSERVKPESTNA
RYNNAESQSYDMALTLGKDAWLFGIDSQLSTHNSVITDPSKPIFKVDNFNQVQDDTYSLF
AQWQQDIDHWQWQLGARVKHYRTDADEVNHSMAAAMPAIKVLMDRYNQADRAQAQTGVDL
VINGRYRVNSDLTWILGLARKQDSASYQQRYLWIPMQSTGGLADGRTYVGKMDLELETAY
QLELGADFNRQGLSISPRFFLHRIDDYIQGVKSRDPAVIMAANMMGSEDPMEFANVDAQL
LGMDINASYEINAQWQLDLLASYVSGERRDIDDNLYRIAPPKINLGLNYQQGNWSARIEG
VMVAAQDKVSVSQSEQTSAGYGLVNLMMAYDAPAWQIKAGVKNLFDVDYEDHLGGYNRVF
NADLAPGQRMPGTGLNAWLAGEYRF
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggcactgcgtttttcctatcttaccctttccattggcgcagccttgttgacactcccc
tttgtccaggctcaagaagccgccttcgaggtgataaaggtatatggcgcccatcaggac
aactttacttctgtcacccccgaggcccaggctcctgtgagcgacatcagcggcttactc
tctaaactgccagggacagcggtaaatggtaatggtcccctgacaggcattgcgcaatat
cgtggtctgtttggcgacagggtcaacactcagatcaatggtgtatcgctcgccggcgcg
ggccctaatgctatggacaccccgctgagttatgccagcctgatcaacagcgaacgtgtc
gagatgcaccggggtattgcccccgtctccgccggtaccaatacccttggcggcagtatt
aaagtgatcgaatctcaggccacttttaacgatacccaaggacgcattgctggccaatat
caaggcaacggtgcacagagtcatcttggcgccaaggtcaatgtgggcggcgagcagcat
gccctattgatttatggcgacctgatgcatggggataaagatctcaaaagtggcagcggc
ctgcatatttcccctagcggctatgacaagcagatggtcggcggtcaatatcgctttaat
cttagcgataagggattagacgctgaatctattgccatcggctatcagcatctggaaacc
accgaagcaggcacgcccgccttgcccatggatattgacttcattcgcaccgacagagtt
aaactcgaaggcgaacataacctggacagctgggggctgaactggcatctggcgtatagc
gacgccagacacggcatggacaactttagcgagcgagttaaaccagagagcacaaatgcc
aggtacaacaacgccgagagccagagctatgatatggcgctgacactgggtaaagacgcc
tggctatttggcatcgacagccaactcagcacgcacaactcggtgatcaccgatcccagc
aagcctatctttaaggtcgacaactttaatcaggtgcaggacgatacctacagcctattt
gcccagtggcaacaggatattgaccattggcagtggcaacttggtgccagggtaaagcac
taccgaaccgatgcagacgaggttaaccactccatggctgctgccatgcctgccatcaaa
gtattaatggacaggtataaccaggccgatcgcgctcaagcacaaacaggcgtggatctg
gtgattaatggccgctatcgagtcaattcggatctcacctggatactaggcttagcccgc
aaacaggacagcgccagctaccaacagagatacctgtggatcccaatgcagtccacaggt
ggcctggccgacggccgcacctatgtgggcaaaatggatttggagctggaaaccgcctat
cagctggaactcggcgccgacttcaatcgtcaggggctaagtatcagcccgcgatttttc
ttgcatcgtatcgacgactatatccaaggggtcaagtcgcgcgatcctgcggtgatcatg
gcagctaatatgatgggcagtgaagatcccatggagtttgccaatgtcgatgcccagtta
ctggggatggatatcaatgccagctacgagatcaacgcccaatggcagctggatctgctg
gccagttacgtcagtggtgagcgccgcgacatcgacgataacctgtatcgcattgcgccg
cctaagatcaaccttggcctcaattaccaacaaggtaactggtcggcccgtatcgaaggg
gtcatggtagccgcgcaggacaaggtctctgtcagccaatctgaacagaccagcgccggc
tatggcttagtcaacttaatgatggcctatgacgcaccagcctggcagataaaagccggg
gtaaaaaacctgtttgatgtcgactatgaagatcatctcggtggctacaaccgggtattt
aatgccgatctcgcccccggacaacgtatgcctggcacaggccttaacgcctggctagca
ggagaataccgcttctaa
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