Shewanella marisflavi: CFF01_17005
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Entry
CFF01_17005 CDS
T05400
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
smav
Shewanella marisflavi
Pathway
smav00470
D-Amino acid metabolism
smav00550
Peptidoglycan biosynthesis
smav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smav00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CFF01_17005
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CFF01_17005
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
smav01011
]
CFF01_17005
Enzymes [BR:
smav01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
CFF01_17005
Peptidoglycan biosynthesis and degradation proteins [BR:
smav01011
]
Precursor biosynthesis
Amino acid ligase
CFF01_17005
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
XdhC_C
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
ASJ98147
UniProt:
A0AAC9U2W9
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All DBs
Position
complement(3866357..3867688)
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AA seq
443 aa
AA seq
DB search
MASQYTHIVLGLGATGLSVVRYLTKQGITPLVMDSRENPPGRELLTQEFPEVLLLTGGFD
CRYLVQASQIVVSPGIPLDTAEVRAAVDMGIDIVGDVELFARALQGREACVIGITGSNGK
STVTTLVGEMAAAAGLNYAVGGNIGVPVLDLLEGNHDLYVLELSSFQLETTSSLNCISAT
CLNISEDHMDRYSDLESYRQAKLRLYDQTKLAIFNRDDLLTRPNEPMNQNSFGLSLPEGD
EWGVSHGVLVHGATEYLACDQVALVGSHNQANLLVAMALADSAGIAKAVMVDVAKRFKGL
AHRCELVAKHQGVSYVNDSKATNVGATLAALQGLSDHEGQIILIAGGDGKGADFSVLRHA
LMGVSQVITLGQDGDRIAEQFDGAIRVETMQEAVVQAAQLAKPGDIVLLSPACASLDMYS
NFMARGDDFRAQVAALNDEVVHA
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggccagtcagtatacacacatagtattgggactcggcgccactgggctgtcggttgtg
cgttatttaactaagcaaggcattacgccgctggtgatggatagccgcgagaatcctccg
ggacgcgagctcttgacgcaagagttccctgaggtgttgttgctgaccggaggcttcgat
tgtcgctatctggtgcaggccagccagattgttgtgagtccagggatccccttggatacg
gccgaagtgcgcgccgccgtggatatggggatcgatattgttggcgatgtcgagctgttt
gccagagctctgcaggggagagaagcctgtgtgatcggcattaccggttcaaacggcaag
tcgactgtcaccaccctggtgggtgagatggcggctgctgccggactcaattatgccgtt
ggcggcaatatcggtgtgccagtgcttgatctgcttgagggcaatcatgatctgtatgta
cttgagttgtcgagttttcagttagaaaccacctcaagccttaattgtatcagcgccacc
tgtctgaacatcagtgaagatcatatggacaggtattcagatcttgagagctatcgtcag
gccaagctgcgcttgtacgatcagaccaagctggcgatttttaatcgtgacgatctgctg
acccgtcctaacgagccgatgaatcaaaacagctttggcctctcgctgcccgaaggggat
gaatggggcgttagccatggcgttttagttcatggtgcaaccgaatatttggcctgcgat
caggtggctttggtcggcagtcataatcaggccaatctgttggtcgccatggccttggca
gatagtgccgggatcgcaaaggcggtcatggtcgacgtagcaaagcgcttcaagggcctg
gcgcaccgttgtgagctggtcgcaaaacatcagggcgtaagctacgtaaacgattctaag
gcgaccaatgtgggcgctaccctagcggctttgcaagggctgagtgaccatgaggggcag
atcattttgatcgccggtggtgacggtaagggcgccgatttctctgtgcttcgccatgct
ctgatgggggtcagtcaagtgatcacgctaggtcaggatggtgacagaattgccgagcag
tttgatggtgcgattcgggtcgagactatgcaagaggcggtcgttcaagcggcgcagctt
gctaagccgggagatatagtgctgctatcgccagcctgtgccagcttggatatgtatagc
aattttatggccaggggtgatgattttcgtgctcaggtagctgcactcaacgatgaggtg
gtgcatgcgtag
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