Shewanella marisflavi: CFF01_17700
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Entry
CFF01_17700 CDS
T05400
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
smav
Shewanella marisflavi
Brite
KEGG Orthology (KO) [BR:
smav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smav03000
]
CFF01_17700
Transcription factors [BR:
smav03000
]
Prokaryotic type
Helix-turn-helix
Other families
CFF01_17700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
GAF
HTH_8
AAA_5
PAS_4
AAA_2
HTH_30
AAA_3
PAS
Mg_chelatase
HTH_7
HTH_22
MCM
AAA_22
nSTAND6
AAA_7
Diguanyl_cycl_sensor
PAS_8
IclR_C
HTH_11
Motif
Other DBs
NCBI-ProteinID:
ASJ98275
UniProt:
A0AAC9XPS1
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Position
complement(4021141..4022916)
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AA seq
591 aa
AA seq
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MTIALQTQAWLSDSWSRSQGAGLDEAKLPQELRLNADALAERHHANQQLIALTKQHALPL
FNQIMTHTQSRLILSDRDGYVLCHWGVSRYSDKLANVALDVGVNWREEHKGTNAIGTALT
ARQPVAVIGDQHFIRHHRFMSCTASPIFSPEGELLGAIDITSEQQRHTQQTLVLIASLVQ
QIETALLCHLPGSHYRIDLAEQASLITSGWQGIVVANADGKILGCNAMAKRLLHRPLIGD
DIHQHLGSRWHSGAPVCQQQRLHLKTQELVVTKPSQLVSQQIGVRFRDPKLERAWQQANK
VVSRNIPLLICGETGVGKEQFVKKLHAQSARAQRPLVAVNCAALPAELVESELFGYQPGA
FTGASRQGFEGKIRQADGGFLFLDEIGEMPTATQSRLLRVLQEREVVPVGGNRSYKVDIQ
VVAATHADLRQLVSQGAFREDLYYRLNGLQVSLPPLRQRTDIERIIHKLHKRYRQAPQQL
CPELLQRLLAHDWPGNLRELDNLMQVACLMADGDPELNWQHLPDTIQAQLNQAGEINSQM
TASESELSLVVNANIVSSFHRFEGNVSRCAKHLGISRNTLYRKLKALGLKP
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgacgatagctctacagacacaagcttggctgtcagactcatggtcgcgtagccaaggg
gctgggctggatgaagccaagttacctcaagagttgcgcctcaacgccgatgcacttgcc
gagcggcatcacgccaatcagcaactcatcgccctcaccaagcaacatgcattgccactg
tttaaccagataatgacccatacccagagccggttgatcctctcagatcgtgacggctat
gtgctttgtcattggggggtgagccgttactctgacaagctggccaatgtggccctggat
gtgggggttaactggcgcgaggagcataagggcaccaacgccatcggcacggcattgacc
gccaggcagcccgttgccgtgataggcgatcagcactttattcgtcaccacaggtttatg
agctgcaccgccagccctattttttcgcccgaaggtgagctgcttggcgctatcgatatc
accagcgagcagcagcgtcacacccagcagaccttggtattaattgccagcctggtgcag
cagatagaaaccgcgctgctgtgccatctgccgggcagtcattaccgcatcgatctggca
gagcaggcgtcactcatcacctcggggtggcagggaatcgtggtcgccaatgccgatggc
aagatcttaggctgtaacgcgatggcgaagcgcttgttgcatcgcccgcttattggtgac
gatattcatcaacatctggggagtcgttggcatagtggtgccccagtgtgtcagcagcag
cgccttcatctcaagacccaagagttggttgtcactaagccgagccagttggtgagccag
cagataggggtgcgctttcgtgaccctaagttagagcgtgcctggcagcaggccaataag
gtggtgagccgcaatattcccctgctgatctgtggtgaaaccggggtgggcaaggagcag
tttgtgaagaaactccatgctcaaagcgctcgtgcccagcgtcccttagtagcggttaac
tgcgccgcgctgccggccgaactggtggaatctgagttgtttggttatcagcccggcgcc
tttaccggggctagtcggcaagggtttgaggggaagatacgtcaggccgatggcggtttt
ttgtttctcgacgagataggtgagatgccgacggcgactcagagccggctgctcagagtc
ttgcaggagcgggaagtggtgcctgtgggcggcaatcgcagctataaggtggatattcag
gtggtggccgcgacccacgccgatctgcgtcagctggtgagccaaggcgcgtttagggaa
gatctctattaccgcctcaatggcctgcaggtgtcactgccaccgctgcgccagcgcacc
gatattgagcgcatcatacataaactgcataagcgctatcgtcaggcgccacagcaactt
tgcccagaactcttacagcgcctgttggcccatgattggccgggcaacctgcgcgagttg
gataacctgatgcaggtagcttgcctgatggccgacggcgacccagagctcaactggcaa
catctgccggacaccatacaggctcagcttaatcaggctggagagataaatagtcagatg
acggcaagcgagagtgagctgagtctggtggtaaacgctaatattgtctctagtttccac
cggtttgagggcaacgttagccgctgcgccaaacatctggggattagccgtaataccttg
tatcgcaaactcaaggccttgggccttaaaccctga
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