Shewanella marisflavi: CFF01_17860
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Entry
CFF01_17860 CDS
T05400
Name
(GenBank) AsnC family transcriptional regulator
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
smav
Shewanella marisflavi
Brite
KEGG Orthology (KO) [BR:
smav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smav03000
]
CFF01_17860
03036 Chromosome and associated proteins [BR:
smav03036
]
CFF01_17860
Transcription factors [BR:
smav03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
CFF01_17860
Chromosome and associated proteins [BR:
smav03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
CFF01_17860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_AsnC-type
HTH_24
AsnC_trans_reg
HTH_20
HTH_5
MarR
HTH_CodY
HTH_11
HTH_36
UPF0122
MarR_2
HTH_IclR
HTH_Crp_2
HTH_34
HTH_1
HTH_27
Tai4
TrmB
Rrf2
HTH_23
Mu-like_Com
ApoLp-III
Fe_dep_repress
LexA_DNA_bind
HTH_9
Motif
Other DBs
NCBI-ProteinID:
ASJ98305
LinkDB
All DBs
Position
4054558..4054986
Genome browser
AA seq
142 aa
AA seq
DB search
MDKFDKAIISALRQDARQSVSSIADTVSLSRSAVSERIKKLEQTGIIRGYQVLLSESQKE
GVSAYFEIQHRCPRCADVVHVFQSIPEVITCRGITGDMDLLVYVQADSMRRLHEIREYID
AQTDIIKLKTHVVMSEWIDNRG
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
ttggataagtttgataaggccatcatcagcgccctgcggcaagacgccaggcagagtgtt
tccagcatagccgacaccgtcagcctgtcacgcagcgccgtctccgaacggatcaagaaa
ctggaacagactggtattattcgtggctaccaagtgctactgagcgaatcgcaaaaagag
ggcgtttctgcctacttcgaaattcagcaccgctgcccccgctgtgccgatgtggtgcat
gtgtttcagtcgatccccgaggtgatcacctgccgcggcatcacgggcgacatggatctg
ctggtttatgtgcaggccgattcgatgcgacggttacacgagatccgcgaatatatcgac
gcccaaaccgacatcatcaaactcaaaacccatgtggtaatgagcgaatggatcgacaat
cgtggctaa
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