Shewanella marisflavi: CFF01_18035
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Entry
CFF01_18035 CDS
T05400
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
smav
Shewanella marisflavi
Brite
KEGG Orthology (KO) [BR:
smav00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
CFF01_18035
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
YqgF
HHH_7
OB_PDCD11
S1_RRP5
HHH_6
T2SSK
RuvX
Motif
Other DBs
NCBI-ProteinID:
ASJ98338
LinkDB
All DBs
Position
complement(4090061..4092424)
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AA seq
787 aa
AA seq
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MQNIAQIIAQELNVREQQVTATITLLDDGATVPFVARYRKEVTGGLDDTQLRTLYSRLGY
LRELNDRRQVILSSIQAQGKLTSELQAAIDQADSKTRLEDLYLPYKPKRRTKGQIAIEAG
LEPLVDRLLADRQADIEALASEYLNAEAGFDDVKAVLDGARFILMERFAEDAELLQKVRQ
HLTQSAVLESRVLKGKEKEGAKFRDYFEHSEKLMNVPSHRALAMLRGRNEGILSLSMNAD
PDNESKQGSYCEVIIADHFNLKLSDSAVDQWLKLVVTSTWRIKIALQMETEFIAKLRERA
ETEAINVFARNLGDLLMAAPAGAKATLGLDPGLRTGVKVAVVNNTGKLMAHSTIFPHAPQ
NQWEKSIRTLANLVKMHKVELIAIGNGTASRETDKLAGEVIAAVKGEMPTLTKIMVSEAG
ASVYSASELAAEEFPDLDVSIRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDVSQSQL
SQSLEAVVEDCVNGVGVDLNMASMPLLTQVAGLNKTLARNIVEYRDQNGQFTSRKQLLKV
PRLGPKAFEQAAGFLRIREGENPLDASAVHPETYALVERIAKAQQQAVDALIGNKDLLKQ
IDAKAFVTEEFGLPTIEDILSELDKPGRDPRGEFKTAVFKEGVEEIKDLKLEMILEGVVT
NVTNFGAFVDIGVHQDGLVHISSLTDKFVSDPHTVVKAGDVVKVKVMEVDVERKRISLTM
RLDEKPGEKASAHQGAKGPAKGPQGKGSQGKGHQGKSQPKGQFKQPKAPANAAMGNAFAD
AFAKFKK
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatattgcacaaatcatcgctcaggaactcaatgttcgtgagcagcaagtgacg
gcaactatcactctactggatgacggcgcgacggtacctttcgtggcgcgttatcgtaaa
gaggtcacaggtggtttagacgatacccaactgcgcacgctatatagtcgcttaggctat
ctgcgcgaactcaacgatcgccgtcaggtgatcctctccagcatccaggcccagggcaaa
ctgaccagcgagctacaggccgctatcgaccaggccgacagcaagacgcgtctggaagac
ctttatcttccctataagcctaagcgtcgcaccaaggggcagatcgccatcgaggcgggg
ctggaacctttagtggatcgtttacttgccgatcgtcaggcggatatcgaggccttggcg
agcgagtacctcaatgccgaggcgggttttgatgacgtaaaagctgtgctcgatggcgct
cgtttcatcctgatggagcgttttgccgaagatgccgagctgctgcagaaggtgcgtcag
catctgacccagagcgccgtgctcgaaagccgtgtgcttaagggcaaggagaaagagggc
gccaagttcagagactattttgaacacagcgaaaagctgatgaatgtgccgtcgcatcgt
gcgctggccatgctgcgtggtcgcaatgagggcattttgagcctgagcatgaatgccgat
cccgataacgagtctaagcagggcagctattgcgaggtgattatcgccgatcactttaac
ctaaagctcagtgactcagcggtggatcagtggcttaagctagtggtcacgtcgacctgg
cgtatcaagatcgctttgcagatggaaaccgaatttattgccaagctgcgtgaacgcgcc
gagaccgaggcgattaacgtcttcgcccgtaacctgggcgatctgctgatggcagcccct
gccggtgctaaggcgacactggggttagacccagggctgagaaccggcgtcaaggtggcc
gtggtgaacaacacgggtaagctgatggcgcactccaccatcttccctcatgcgccgcaa
aaccagtgggagaagtcgatccgcaccttggccaatctggttaagatgcataaggttgag
ctgattgccattggcaatggcacggcgtcgcgcgagactgacaagctggcgggagaggtg
attgccgcggtgaagggtgagatgccgacactcaccaagatcatggtgagcgaggcgggt
gcctctgtctattctgcctctgagttggcggcggaggagtttcccgatctggatgtatcg
attcgtggcgccgtctctatcgcccgtcgtctgcaggatcctttggccgagctggtgaag
atcgaacctaagtctatcggtgtgggacaatatcagcacgatgtgagccagagtcagctg
tcccagtctcttgaagccgtggtggaagattgtgtaaacggtgttggcgtggatctcaac
atggcttctatgccgctgttgactcaggttgcgggcttaaacaagacgctagcgcgtaat
atcgtcgagtatcgcgaccagaatggtcagtttacctcgcgtaaacagctgcttaaggtg
ccacgtctcggtcctaaggcgttcgagcaagccgccggtttcctgcgtattcgagaggga
gaaaacccattggatgccagtgctgtgcatcccgagacctacgccctagttgagcgtatt
gccaaggcgcaacaacaggcggtcgatgccctgatcggcaacaaagatctgctcaagcag
atcgatgctaaggcgtttgtgaccgaagaatttggtttgcctaccatagaagatattctc
agcgagctggataagccgggccgtgaccctagaggcgagtttaagaccgccgtgtttaag
gaaggggtcgaggagatcaaagatcttaagcttgagatgatcttagagggcgtggtgacc
aatgtgaccaacttcggtgccttcgtcgatatcggtgttcatcaagatggtttggtacat
atctcctcgcttaccgacaaatttgtcagcgatccccataccgtggtgaaggcgggtgat
gtggtcaaggtgaaggtgatggaagtcgacgttgagcgtaagcgtattagcctgaccatg
cgtctggatgagaaacccggcgaaaaggcaagtgctcatcagggagccaaggggcctgct
aaagggccacagggtaagggaagtcagggtaaaggccatcaaggcaagagtcagcctaag
gggcaatttaagcagcctaaggcgccggccaacgcggccatgggtaacgcctttgccgat
gcctttgctaaatttaaaaaatag
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