Shewanella marisflavi: CFF01_18215
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Entry
CFF01_18215 CDS
T05400
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
smav
Shewanella marisflavi
Brite
KEGG Orthology (KO) [BR:
smav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smav02000
]
CFF01_18215
Transporters [BR:
smav02000
]
Other transporters
Pores ion channels [TC:
1
]
CFF01_18215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
OMP_b-brl_3
CFAP143
Motif
Other DBs
NCBI-ProteinID:
ASJ98369
UniProt:
A0AAC9U3P0
LinkDB
All DBs
Position
complement(4128848..4130917)
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AA seq
689 aa
AA seq
DB search
MKNKQEVLKYSLIAAAVAATPQAMAEQVKHESLLDVTEVIVVKGEKPTPLQQTTSTWSIS
AAEIQASGAQSLDQILKNAPGVYVRTGGQGTPRVDIRGFKSRHVIYLINGVPANGAEDGQ
FDPSVVPASQIASVTVSMGPTSVLYGAGGAGGVINIRTKQGADIPGFSGHLEGSENDTFN
GDVTLAGSGDRWQGLVSFSRQQSDGWPVSDDQPDTELQQGDTRVNSDKTVNNLFAQGSYW
LSDSTQLMANVSLRSGEWGKPTLDGTTSRKAKFERVDDYDEHTLQLGVAHSFNELLTLRG
FVYQNQSDVLETRYLDDSFEALQQTLDGRSVVSGGNIQLIADFDKGHLLTGAVIAEHQSW
ESSSKQLDDNNADSGSGKGSGSGTGSGTGGGSGSGSGSGSGSGNGSGGAEAFDDSSWLYT
LAAEYQYQQAHFGASLGGALHEQQRVREDESDYSAQASAYWQAAEATRINLGLARKVRFP
SMRNLYSLSSGNQDLQSEISKHLELSLAQGLGHNTDLSLAAYYTDADNYIAKDVDGIYQN
MGRYQFKGVDLLVRDQSIDNLSLSFGYSFLDSEDRDAAPGLENLEYRPRHQLRLQADYEF
SFATRIHFNIEHIMGQVYQAQEKVAGKKLLMEKSLDDYTLVDLKLSHPIAGDALSLYLRA
TNLLDERYYQSEGLPQAGRQVFLGVNWQL
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacaaacaagaagttctcaaatattcactcattgcggccgccgttgcggccact
ccacaggcgatggccgaacaggtcaagcatgagtcgctattagatgttaccgaagtcata
gtggttaaaggtgaaaagccgacgccgttgcagcagacgaccagtacctggagcatcagc
gccgctgagatccaagcatcgggcgcccagagtctggaccagatattgaaaaatgccccg
ggtgtttatgtgcgcaccggtgggcaaggcacgcccagggtggatatacgcggctttaaa
tccaggcatgttatctacctgatcaatggtgtacccgccaacggcgccgaagatggtcaa
ttcgatccaagtgtggtgcctgccagtcaaattgcatcagtgactgtctctatgggccct
acctctgtgctttatggtgcgggcggtgcgggcggtgtgattaatattcgcactaagcaa
ggcgccgatatccctggtttctctggccatctcgagggcagcgaaaatgatacctttaat
ggcgacgtcacccttgctggatctggtgatcgctggcaggggctggtgtcgttctcccgt
cagcagagcgatggctggcctgtgtctgacgaccagccggataccgaactgcaacaaggc
gatacacgggtcaacagcgacaagacagtgaataacctgtttgctcagggcagttattgg
ctgtcggacagtacccagctgatggcgaatgtgagcctgcgtagcggtgagtggggcaag
cctaccctagatggcaccacaagtcgcaaggcgaagtttgagcgcgtcgatgattatgac
gaacatactctgcagcttggcgtggcccatagcttcaatgaattgctgaccttgaggggc
tttgtttatcagaatcagtcggatgtgctggaaacacgctatctggacgatagcttcgag
gctttgcagcagacgcttgatggtcgttctgtggtgagtggcggcaatattcagttaatt
gccgattttgataaggggcatctgctgaccggcgccgtgatcgccgagcaccagagctgg
gagtccagcagcaaacagctggatgacaataatgctgatagcggttcaggcaagggttct
ggctcgggcactggctcgggtactggtggcggtagcggttcaggtagtggctcgggttca
ggttcgggtaatggctcagggggcgccgaggccttcgatgatagctcctggctatacacc
ctggcggctgaatatcagtatcaacaggctcattttggtgccagtctgggcggcgcccta
cacgagcagcagcgtgtgcgtgaggatgaatcagattattcggcccaggcctcggcctat
tggcaggctgctgaggcgacgcgcatcaatttaggtctggcccgtaaggtgcgttttccc
tctatgcgtaacctctattcgttgtcatcgggtaatcaggatctacaatctgagatctct
aaacatcttgagctgagcctggcacaggggctggggcacaatacggaccttagtctggcg
gcttactacaccgacgccgataactatattgccaaggatgtcgatggcatctatcagaac
atggggcgttatcagttcaaaggggtcgatttgctggtgcgtgatcagagcatcgacaac
ttgtcgctcagcttcggctatagcttcttagacagcgaagacagagatgcggcgccaggg
ttggagaacttagagtaccgtccgcgtcatcagctcaggctgcaggcagattatgagttt
agctttgcgacccgtatccatttcaacatcgaacatatcatgggccaggtttatcaggcc
caagagaaggtcgccggtaagaaactgctgatggagaagtcgctggatgactataccttg
gttgatctcaagctgagtcaccctattgctggggatgcgttatcgctttacctcagagcc
accaacttactcgatgaacgctattatcagagcgaggggctgccccaagcgggtcgtcag
gtgttccttggtgtgaactggcagctgtag
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