Sulfurimonas marina: FJR03_01985
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Entry
FJR03_01985 CDS
T08627
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
smax
Sulfurimonas marina
Pathway
smax03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FJR03_01985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smax03019
]
FJR03_01985
03009 Ribosome biogenesis [BR:
smax03009
]
FJR03_01985
Enzymes [BR:
smax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FJR03_01985
Messenger RNA biogenesis [BR:
smax03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FJR03_01985
Ribosome biogenesis [BR:
smax03009
]
Prokaryotic type
rRNA helicases
FJR03_01985
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
MA3
Motif
Other DBs
NCBI-ProteinID:
QOP40574
UniProt:
A0A7M1AT33
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All DBs
Position
complement(373839..375356)
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AA seq
505 aa
AA seq
DB search
MQDNAQQEEKVLTFDDLGLKKEILKSIKFAGFTSPSPIQAQAIPVVLAGRDMVGQAHTGT
GKTAAFSLPALHNMKLDGSVELLVITPTRELATQVSDEIFKYGKNLGVRTVTVYGGSSYK
RQLDLIGRGANVVVATPGRMLDILKKNMLPDFAPSMVVLDEADEMLDMGFLDDITEIFSY
MPTDRQTLLFSATMPQPIKTLAHKILENPEFVSITKGETTNADIEQLYYVIDEHERDDAI
IRLMDSETTKKSVVFCRTKSEVDRLSNVLSNAGYLANGLHGDMEQRQRETVIKGFKSNSV
KVLVATDVAARGIHVNNISHVFNYHIPFDPESYVHRIGRTGRAGTKGKAITLLTPLEFKE
LQKIKKIVGTSMEHAFVPSKNDLRQTNIDNIVKSIEDQKIYDEAHLILDKLKEDIDEETI
MYKLISMILNKQDIKGPSNIGIPADKLQAILDRASKRGGDRNSRGRGGNRRAGHRNSRGR
SGGSRDGGSRSSRGGDSRRRSSNRH
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgcaagacaatgcacaacaagaagaaaaagtactaacgtttgacgacttaggcttaaaa
aaagagatactaaagagtatcaagtttgcagggtttactagcccttctccaattcaagca
caagcaattccagtagttttagctggccgtgatatggttggtcaagcacatacaggtaca
ggtaaaactgcggcattcagccttccagcactacacaatatgaaactagacggttcagtt
gaacttttagttatcactcctactcgtgaacttgctactcaagtaagtgatgaaatcttt
aaatacggtaaaaacttaggtgttagaactgtaacagtttacggcggtagctcatacaaa
cgtcaacttgatcttatcggtcgcggtgcaaacgtagtagttgctacacctggacgtatg
ttagatatcctaaagaaaaatatgcttcctgattttgctccaagtatggttgtacttgat
gaagctgatgagatgttagatatgggatttttagatgacattactgagatcttctcatat
atgccgacagatcgccaaacactacttttctcggcaactatgccacagcctatcaaaaca
ctggcacacaaaattttagaaaaccctgaatttgtttcaatcactaaaggggaaactaca
aatgccgacatcgaacaactttactatgtgatcgatgagcatgagcgtgatgatgctatc
atccgtttaatggatagtgaaactactaaaaaatcggtagttttctgtagaacgaaatct
gaagtagacagactttcaaacgttctttcaaatgctggttatttagcaaacggtttacat
ggagatatggaacaacgtcaacgtgaaacagttatcaaaggttttaaatctaactctgta
aaagtgttagttgcgactgacgttgcagcacgtggtatccatgttaacaacatctctcac
gtatttaactaccatattccgtttgaccctgagtcttacgtacatagaatcggtcgtaca
ggtcgtgcaggaacaaaaggtaaagcgattacacttttaactcctttagagtttaaagag
cttcaaaagatcaaaaaaatcgttggaacttcaatggagcacgcttttgtaccaagcaaa
aacgatcttcgtcaaacaaatattgacaatatcgtaaaaagcatcgaagatcaaaagatc
tatgatgaagcacaccttatccttgataaattaaaagaggatattgatgaagagacgatt
atgtacaagctgatctctatgattcttaataaacaagatatcaaagggccaagtaacatc
ggtatccctgctgataaacttcaagctattttagatcgtgctagtaaaagaggcggagat
agaaattcaagaggccgcggtggaaacagacgcgctggacatagaaactcaagaggacgt
tctggcggttctcgcgatggtggttctcgtagttctcgcggtggagattctagaagaaga
tcgtcgaacagacactaa
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