Sulfurimonas marina: FJR03_06500
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Entry
FJR03_06500 CDS
T08627
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
smax
Sulfurimonas marina
Pathway
smax03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
smax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FJR03_06500 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smax03400
]
FJR03_06500 (uvrA)
DNA repair and recombination proteins [BR:
smax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FJR03_06500 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FJR03_06500 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
UvrA_DNA-bind
SMC_N
AAA_29
nSTAND1
RsgA_GTPase
nSTAND3
AAA_16
AAA_25
AAA_21
AAA_33
APS_kinase
Viral_helicase1
DnaJ_CXXCXGXG
RNA12
DUF6029
Motif
Other DBs
NCBI-ProteinID:
QOP41411
UniProt:
A0A7M1AVC7
LinkDB
All DBs
Position
complement(1265991..1268816)
Genome browser
AA seq
941 aa
AA seq
DB search
MGKKDVIKITGAKENNLKNIDLTIPKNELIVMTGLSGSGKSTLAFDTLYAEGQRRYMESL
SSYARQFLDRVGKPDVDKIEGLTPAIAIDQKTTSKNPRSTVGTITEIYDYFRLLYARVGV
QHCHKCGKVISQMSASDIIAEVAKLPEGAKLVMLAPLVRENKGSYADLIESLVHKGYVRA
MIDGVMVRLDDEIELSKTKKHTIKVVVDRVVVKEDNKDRIASSVEKALKESYGELEIDVL
NHKEVDCKEHIHYSEHNACFDCKISFDPLEPLSFSFNSPKGACSECDGLGLRYTLDIEKI
IDQDLSIEKGAIKIVYGFNKGYYFTFLKGFCEANEIDITIPYSELETHQQKAILHGTIGE
VEFLWKKHKVKRIWPGIVRIAYDMFKDEKELNDYMSEKVCDVCGGHRLKPESLAVKVGEK
KIPELLDMPITKTYEWFAAEDNFSYMDKQNEMVAAPILNEIRERLFFLHDVGLGYITLGR
DARTISGGEAQRIRIASQIGSGLTGVMYVLDEPSIGLHERDTLKLIKTLRNLQEKGNSVI
VVEHDKETIEHADFIVDIGEGAGKFGGSVVFSGTLDKLKKAKTTTADYLFGRKKIEYFYR
REQEKFIEIKNVTLNNIQDLSVKIPLNNFVCITGVSGSGKSSLILQTLLPTARELLNHAR
KVNKVAGVEITGLENVDKVIYLDQSPIGRTPRSNPATYTGVMDEIRNLFAQTKESQIRGY
TASRFSFNVKGGRCEKCQGEGEIKIEMHFLPDIMVKCDSCQGHRYNQQTLEVFYKGKTIS
DVLNMAVDEAYEFFKPIPKIHQKLKTLVDVGLGYITLGQNAVTLSGGEAQRIKLSKELSR
KDTGKTLYILDEPTTGLHFADVDRLTGVLHKFVELGNSVLIIEHNLDMIKNADYIVDMGP
EGGSGGGEIIDVGTPEELAANYEKSGSYTGKYLEKELLLHK
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaaaaagatgttatcaaaataacaggtgcaaaagagaataatcttaaaaatata
gatttaacaattccgaaaaatgaactgatagttatgacagggcttagtggaagtggtaaa
tcaacactcgcttttgatactttgtatgcagaggggcagcgccgctatatggagtcgttg
tcatcatatgcaagacagttcttagacagagtgggcaagcccgatgtagataagatcgag
ggtttaactcctgcgatcgcaattgatcaaaaaacaacttctaaaaacccgcgctcaaca
gttggaacaattacggagatatacgactatttcagacttttatatgcacgtgtaggggta
caacactgtcataaatgtggcaaggtgatctctcagatgtctgcttcagatatcatagcc
gaggtggcaaaactcccagaaggtgcaaagcttgtaatgcttgcacctcttgttcgtgaa
aataaaggctcatacgctgatcttatcgaatcattggtacataaagggtatgtgcgtgca
atgatcgacggtgtaatggtaagacttgatgatgagatcgagctttcaaaaacgaaaaaa
catacgatcaaggttgtagtggatcgtgtagttgttaaagaggacaacaaagatcgtatt
gcatcgtctgtagaaaaagcacttaaagagagttacggtgagttagagatcgatgtacta
aaccataaagaggtagattgtaaagagcatattcactactctgaacacaatgcatgtttt
gactgtaagatcagttttgacccattagaaccacttagtttttcgtttaactctccaaag
ggtgcatgtagcgaatgtgacggtttagggcttcgttacactttagatattgagaaaatt
atagatcaggatttgagtattgagaagggtgctattaagatcgtatacggttttaacaaa
gggtactactttacattcttaaaagggttctgtgaagcgaatgagatcgatatcactatc
ccatactctgaacttgaaacgcatcagcaaaaagctattttacacggaactatcggtgaa
gtggaatttttatggaaaaaacataaagtaaaacgtatctggccgggaattgtccgcatc
gcttacgatatgttcaaagatgagaaagaactcaatgattatatgagtgagaaggtgtgt
gatgtttgtggcggacacagacttaaacctgaatcactagcggtaaaagtgggtgagaaa
aagatccctgaacttttagatatgccaatcaccaaaacgtatgaatggtttgccgcagag
gataacttctcttacatggacaagcaaaatgagatggttgccgcaccgatcttaaatgag
attcgtgaacgtcttttctttttacatgatgttggacttggatatatcactcttggacgt
gatgcacgtacgatctccggtggtgaggcacagcgtattcgtatcgcttcacagatcggc
tcaggtctgacaggtgttatgtatgtacttgatgagccgagtatcggtctgcatgagcgt
gacacgttaaaactgatcaagacccttcgaaaccttcaggaaaaagggaacagcgtgatc
gtggttgaacacgataaagagacgattgagcatgccgactttattgtagatatcggtgaa
ggtgcaggaaaattcggtggaagtgtcgtattctcagggacactcgataagctaaaaaaa
gcaaaaacaacgactgctgattatctttttggaagaaaaaagatcgagtatttttatcgc
agggaacaagagaagtttatagagataaaaaatgtaactctgaacaatattcaagacctg
agtgtaaaaatccctcttaataactttgtatgtattaccggtgtaagtggaagtggaaaa
agttcccttattttacaaacacttttaccgacagcaagagagcttttaaaccatgcaaga
aaagtaaataaagtagcgggtgtagagatcacgggacttgaaaatgtagataaggtgatc
tacctcgatcaaagcccgatcgggcgaactccgagatcaaatcctgcaacttatacgggt
gtgatggatgagatcagaaatctttttgcacaaacaaaagagtctcagatccgcggttat
acggcatcaagattctcttttaatgttaaaggtgggcgttgtgagaaatgtcagggtgag
ggtgagatcaaaattgagatgcacttcttgccggatattatggtgaagtgtgacagctgt
cagggacatagatacaaccaacaaactctggaagtattctataaagggaaaactatctct
gatgttcttaatatggcggtagatgaagcgtatgagtttttcaaaccgattcctaaaatt
catcagaaactaaaaacacttgtagatgtaggtcttggatatattacactcggacaaaat
gcggtaacgctttcaggcggtgaagcacagcgtatcaaactctctaaagagttaagtaga
aaagatacgggaaaaacactttatatcttagatgaaccgacaactggactgcattttgcc
gatgttgacagactgacgggtgttcttcataaatttgttgaactcggtaatagcgtgtta
atcattgaacataaccttgatatgattaaaaatgccgactatattgtagatatgggacct
gaaggtggttcaggcggtggagagattatagatgtcggaacaccggaagagttagctgct
aattatgagaagtcaggatcgtatacaggtaaatatttagaaaaagagttgcttttacac
aagtag
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