Sulfurimonas marina: FJR03_09325
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Entry
FJR03_09325 CDS
T08627
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
smax
Sulfurimonas marina
Pathway
smax03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FJR03_09325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smax03019
]
FJR03_09325
03016 Transfer RNA biogenesis [BR:
smax03016
]
FJR03_09325
Enzymes [BR:
smax01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FJR03_09325
Messenger RNA biogenesis [BR:
smax03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FJR03_09325
Transfer RNA biogenesis [BR:
smax03016
]
Prokaryotic type
tRNA degradation factors
FJR03_09325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
PNPase
MIC19_MIC25
S1_RRP5
OB_RRP5_4th
eIF-1a
S1_2
Motif
Other DBs
NCBI-ProteinID:
QOP41922
UniProt:
A0A7M1AZW7
LinkDB
All DBs
Position
complement(1826870..1829044)
Genome browser
AA seq
724 aa
AA seq
DB search
MKYDVNVELKNKIEEYSFNDVARQANGAAWLKSGDTVILATVVIEENETVSEDFLPLTVQ
YIEKTYAAGKIPGGFFKREAKPSDFETLTSRIVDRSLRPLFPKGFGHPTQITIMVFSVDK
EADLQVLALNAASAALYVSDIDINRSVSAVRAAKIDGELVLNPTLSQLNNSTLDLYLSGT
KEDLLMIEMRSIGSENVEVEPSIEPMLDPINAGMGGVVIDTHLSNALAEDELIEILGKTQ
EVLFEANSKYEESFASFQKEAMPLQLNVNPLNEEMVSYVEQNHMTDIKDAMNQMAKSERS
SALRNLRKSILEAKEDWDESELKAAIENVKKLQVRSQILNEKVRADGRALNEVRPITIDT
NVLPAAHSSCLFTRGQTQALVVLTLGGPKDAQMFETLTDEGTQNENFMVHYNFPGFSVGE
ASPIMGTKRRELGHGNLAKRALEPIVDTDGKTIRLVSEILESNGSSSMATVCGGYMALKA
ADIDTSDTIAGIAMGMVSEGDKYAILSDIMGLEDHDGDMDFKVTGSKDGITAMQMDIKLG
GISLEVLKEALYQAKEGRTHIIDIMLEAQSKIEFNDGVLPTTDFFHIDPSFIGEIIGQAG
KTIREIIEKFEVAIDIDKKEGKVKITGTNKAGIEGAKEHINSIVSKPKVAKIKYEVGDKY
EGTVKRIVDFGAFVELPDGTDGLLHISKISKNRVENVRDVLNEGDKVTVEIIEFKGNKIS
LSMV
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacgatgtaaacgtagagttaaaaaacaaaatagaagagtatagttttaacgat
gtagcacgtcaagctaacggtgctgcttggttaaaatctggagatactgtaatactggca
acagttgttattgaagagaatgaaacggtaagtgaagactttttaccacttacagtacaa
tatatagaaaaaacgtatgcagcgggaaaaatccctggaggcttttttaaacgtgaagca
aaaccaagtgattttgaaacacttacttcaagaattgtagatagaagtttacgccctcta
tttccaaaagggtttggacatccgacacaaattacgattatggtatttagtgtagataaa
gaggcagatctacaagtattggcacttaatgctgcatcagctgctttatatgtttcagat
atcgatatcaatagaagtgtaagtgctgttcgtgctgctaaaattgatggtgaattagtt
ttaaatccaacactttcacagttaaataactcaacgctagatctttacctttcagggaca
aaagaggatcttttaatgatcgagatgcgttcaatcggtagtgaaaatgtagaagttgag
cctagcattgagccaatgcttgatcctatcaatgcaggtatgggcggtgttgtgatcgat
acacacctttcaaatgctcttgcagaagatgaactgatcgagatccttggtaaaactcaa
gaggttttatttgaggcaaacagtaagtatgaagagagttttgcatcatttcaaaaagag
gcgatgccattacagttaaatgttaacccgcttaatgaagagatggtaagttatgtagag
caaaaccatatgacggacattaaagatgctatgaatcaaatggcaaaatctgaacgttct
tcagctcttagaaacttaagaaaatctattttagaagcaaaagaggattgggatgagtca
gagttaaaagctgcgattgaaaatgtgaaaaaactccaagttcgttctcaaattttaaat
gagaaagtacgtgctgacggaagagctttaaatgaagtaagaccaattacgatcgataca
aacgtacttccggctgcacattcatcttgtctgtttacacgtggacaaacacaggctctt
gtagtacttactttaggtgggccaaaagatgcgcaaatgtttgaaacattaacagatgaa
ggtacacaaaacgaaaactttatggtgcattataacttcccaggtttctctgttggtgaa
gcaagcccaatcatgggaacaaagcgtcgtgaacttgggcacggtaacttagctaaacgt
gctctagagccgatcgtagatactgatggaaagactatccgtttagtttctgagatcctg
gagtcaaacggttcaagttcaatggctactgtatgtggtggatatatggcacttaaagct
gctgatatcgatacttcagatactattgccggaattgcgatgggtatggtaagtgaaggt
gacaagtatgctattctttcagatattatgggacttgaagatcacgacggtgatatggac
tttaaagtaacgggttcaaaagacggaatcactgctatgcagatggatataaaacttggt
ggtatctcactggaagttttaaaagaggcactttaccaagcaaaagagggtcgtactcac
attatcgacattatgcttgaagctcaaagcaaaatcgagtttaatgacggtgtacttcca
acaactgatttcttccatatcgatcctagttttatcggtgagattattggtcaggcagga
aaaactattcgtgaaattattgagaagtttgaagttgctatcgatatagataaaaaagag
ggtaaagttaaaattacaggtacaaacaaagccggtattgaaggtgcaaaagagcatatc
aactctatcgtgtcaaaaccgaaagttgcaaaaattaagtacgaagttggtgacaaatat
gaaggtactgtaaaacgtatagttgattttggtgcttttgttgagcttccagatggtaca
gacgggcttcttcatatctctaaaatctctaaaaacagagtagagaatgtaagagatgta
ttaaatgaaggtgacaaagtaacggtagagattattgagtttaaaggtaataagatctct
ttatctatggtataa
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