Sulfurimonas marina: FJR03_10240
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Entry
FJR03_10240 CDS
T08627
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
smax
Sulfurimonas marina
Pathway
smax03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FJR03_10240 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smax03019
]
FJR03_10240 (recQ)
03400 DNA repair and recombination proteins [BR:
smax03400
]
FJR03_10240 (recQ)
Enzymes [BR:
smax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FJR03_10240 (recQ)
Messenger RNA biogenesis [BR:
smax03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FJR03_10240 (recQ)
DNA repair and recombination proteins [BR:
smax03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FJR03_10240 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
QOP42096
UniProt:
A0A7M1AXQ3
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All DBs
Position
2018427..2020199
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AA seq
590 aa
AA seq
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MKQQVLKEFFGHNSFRELQEEGVDAILNGRDLLMILPTGGGKSLVYQLPTMMMNGVTIVI
SPLIALMQDQVASLQAQDIPAAMFSSAQNFEEIEETIRDLYANKLKFLYLSPERLNNPHT
LEILRNININFFVIDEAHCISQWGHEFRDDYRSLGQLKNNFPSTTIAAFTATSTNHVTED
ILRELQLQNPLLLKGKIFRKNLFISAQRRISNGQAQLKNFLLNHENESGIIYVSSRKKAE
DLSSQLNQAGYKTLPYHAGLPQHIREQNFKLFVNDRVNIMVATIAFGMGIDKADIRFVVH
MSLPKSLENYYQEIGRAGRDGENSEVLLLFNAGDIMQHKRYLDEITDERYKEHLAEKIDT
IYKYATSELCFHQQLASYFEDKIEECSDRCENCLNDDESRDITKEAQMLLSCIYKTEQTF
GKNYIIDVLRGSTEQKLLANKADKLSVYGIGSHLSKKEWFVIVERLLELGILTLGEFQAL
KLTNDAVAVLKSRQLVTIKASRLNVLEKQKAKKIEEEFDYDRELFEKLREKRKELADELE
LPAYLIFSDKTLKHLANEMPTNKEEMLEINGIGLKKYTQYGEEFLDIINS
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaacaggttttaaaagagttctttgggcataacagcttcagagagctgcaagag
gaaggcgtagatgctattctaaatggtcgcgatctccttatgatccttccaacaggcggg
ggaaaaagtttagtctatcagctcccgactatgatgatgaacggtgtaacgattgttata
tcaccgctaatcgcacttatgcaagatcaggtcgcttcacttcaagcacaagatatccct
gccgctatgttttcatcagctcaaaattttgaagagattgaagagactattcgcgatctc
tatgccaataagttaaagtttttatatctttcacctgagagactgaataatccacacact
ttagagatcctgcgaaatatcaacatcaactttttcgtgatcgatgaagcgcattgtatc
tcgcagtgggggcatgaatttcgtgatgattaccgctctttaggacagttaaaaaacaac
tttccctctactacaattgcggcttttacagctacctcaaccaaccatgtaacagaggat
attttaagagaactgcaactccaaaatccgctgctgctcaaagggaagatctttcgtaaa
aacctttttatttcggctcagcgacgaatctcaaatggacaggctcagctgaaaaacttt
cttctcaaccatgagaatgaatcgggaatcatctatgtaagttccagaaaaaaagcggaa
gatctaagcagccagctcaaccaggccggatacaagactctcccataccacgcaggattg
ccgcaacatatacgagagcagaactttaaactctttgtcaacgaccgtgtcaatatcatg
gtagcaactattgcatttggaatgggaatcgataaagccgacatccgctttgtggtgcat
atgagtctgccgaaatctctggagaactactatcaggagattggacgtgcgggacgtgac
ggtgaaaactctgaagtattactgctgtttaatgccggtgacattatgcaacataaacgc
tacctcgatgagataacagatgagagatataaagaacatctcgccgaaaagatagatact
atctacaaatacgcaacaagcgagctttgtttccaccaacaactagcttcctactttgaa
gacaagattgaagagtgcagcgatcgatgtgaaaactgtttgaatgatgatgagagccgt
gacataacaaaagaagcgcaaatgcttcttagctgtatctataaaacagaacaaacattt
ggaaagaactacatcatcgatgtgcttcgcggctcaacagagcagaagcttttagccaat
aaagcggataaactctcggtttacggcatcggctcacacctcagcaaaaaagagtggttt
gtgatcgtggagcgccttttagagcttggaatccttacacttggagagtttcaggcgctc
aaacttacaaacgatgcagtagctgtactcaaatcacgccaattagtgactattaaagcc
tcacgactcaatgtgcttgaaaaacaaaaagcgaagaaaatagaagaggagtttgactac
gatcgagaattgtttgaaaaacttcgagaaaaaagaaaagagttagccgatgaacttgaa
cttcctgcttatctcatcttcagtgacaaaactttaaaacatctggcaaatgagatgccg
acaaataaagaggagatgttggagataaacggaatcggacttaaaaaatatacccagtac
ggtgaagagtttttagatataatcaactcctaa
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