KEGG   Shewanella mangrovisoli: K0H60_02485
Entry
K0H60_02485       CDS       T09316                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
smay  Shewanella mangrovisoli
Pathway
smay00010  Glycolysis / Gluconeogenesis
smay00020  Citrate cycle (TCA cycle)
smay00260  Glycine, serine and threonine metabolism
smay00280  Valine, leucine and isoleucine degradation
smay00310  Lysine degradation
smay00380  Tryptophan metabolism
smay00620  Pyruvate metabolism
smay00630  Glyoxylate and dicarboxylate metabolism
smay00640  Propanoate metabolism
smay00670  One carbon pool by folate
smay00785  Lipoic acid metabolism
smay01100  Metabolic pathways
smay01110  Biosynthesis of secondary metabolites
smay01120  Microbial metabolism in diverse environments
smay01200  Carbon metabolism
smay01210  2-Oxocarboxylic acid metabolism
smay01240  Biosynthesis of cofactors
Module
smay_M00009  Citrate cycle (TCA cycle, Krebs cycle)
smay_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
smay_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
smay_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
smay_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:smay00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    K0H60_02485 (lpdA)
   00020 Citrate cycle (TCA cycle)
    K0H60_02485 (lpdA)
   00620 Pyruvate metabolism
    K0H60_02485 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    K0H60_02485 (lpdA)
   00640 Propanoate metabolism
    K0H60_02485 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    K0H60_02485 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    K0H60_02485 (lpdA)
   00310 Lysine degradation
    K0H60_02485 (lpdA)
   00380 Tryptophan metabolism
    K0H60_02485 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    K0H60_02485 (lpdA)
   00670 One carbon pool by folate
    K0H60_02485 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:smay04147]
    K0H60_02485 (lpdA)
Enzymes [BR:smay01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     K0H60_02485 (lpdA)
Exosome [BR:smay04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   K0H60_02485 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_oxidored AlaDh_PNT_C GIDA FAD_binding_2 HI0933_like Thi4 NAD_binding_8 FAD_binding_3 DAO
Other DBs
NCBI-ProteinID: QYK09589
LinkDB
Position
538678..540105
AA seq 475 aa
MSNEIKTQVVVLGAGPAGYSAAFRAADLGLETVIVERFSTLGGVCLNVGCIPSKALLHVA
KVIEEAKAVAAHGVVFGEPTIDLDKLRSFKQKVISQLTGGLGGMSKMRKVNVVNGFGKFT
GPNSLEVTAEDGTVTVVKFDQAIIAAGSRPIKLPFIPHEDPRIWDSTDALELKEVPGKLL
VMGGGIIGLEMGTVYSSLGSEIDVVEMFDQVIPAADKDVVRVFTKQIKKKFNLILETKVT
AVEAREDGIYVSMEGKSAPTEPVRYDAVLVAIGRTPNGKLIDAEKAGVKIDERGFINVDK
QLRTNVPHIYAIGDIVGQPMLAHKGVHEGHVAAEVIAGMKHYFDPKVIPSIAYTDPEVAW
VGLTEKEAKEQGIAYETATFPWAASGRAIASDCSEGMTKLIFDKDTHRVIGGAIVGVNGG
ELLGEIGLAIEMGCDAEDLALTIHAHPTLHESVGLAAEIYEGSITDLPNPKAKKK
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgagtaacgaaatcaaaactcaggtagtggtattaggtgcaggtcctgctggatattct
gctgccttccgtgcggctgacttaggtctggaaaccgttatcgttgaacgttttagcact
ttaggtggcgtgtgtctgaacgtgggttgtatcccatctaaagccctgttacacgttgct
aaagtcatcgaagaagccaaagccgttgctgcacacggtgttgtgttcggcgagccaaca
atcgatttagacaagttacgcagcttcaagcaaaaagtgatcagccagttgactggtggc
ttaggcggcatgtctaaaatgcgtaaagtaaacgttgttaatggcttcggtaaatttact
ggccctaacagcttagaagtgaccgctgaagacggtactgtgaccgttgttaagtttgac
caagcgatcatcgctgcgggctctcgcccaatcaaactgccattcattccccatgaagac
ccacgtatttgggattcgaccgacgcattagaactgaaagaagtgcctggcaaactgctg
gttatgggcggcggtatcatcggtttagaaatgggtacggtttactcttctctgggcagt
gaaatcgacgtggttgaaatgttcgaccaagtgatccctgcggctgacaaagacgtcgtt
cgcgtattcactaagcaaatcaagaagaaattcaacctgatcctcgaaaccaaagtgaca
gcggttgaagcccgtgaagacggtatctacgtttcgatggaaggtaagagcgcgccaact
gagccagtacgttacgatgcagtgttagtggctatcggccgtacgccaaatggcaagctg
atcgacgctgaaaaagcaggcgttaagattgatgagcgtggtttcatcaacgtagacaag
caattacgtacaaacgtaccgcacatctacgcaatcggtgacatcgttggtcaaccaatg
ttggctcacaaaggcgtgcacgaaggccacgtagcggccgaagtgatagcgggtatgaag
cactacttcgatccaaaagtcatcccatcaatcgcttacacagaccctgaagtggcttgg
gtaggtctgactgagaaagaagcgaaagagcaaggtattgcttacgaaacagcgactttc
ccatgggctgcttctggccgtgcaatcgcttctgattgcagcgaaggtatgactaagctg
attttcgataaagacactcaccgcgtaatcggtggtgctatcgtgggtgttaacggtggc
gaactgttaggcgaaatcggtctggcaattgaaatgggttgtgatgctgaagatttagca
ttaactatccacgctcatccaactctgcacgagtcagtaggtctagcggctgaaatctac
gaaggttctattactgacctgccaaacccaaaggcaaagaaaaagtaa

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