Shewanella mangrovisoli: K0H60_02670
Help
Entry
K0H60_02670 CDS
T09316
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
smay
Shewanella mangrovisoli
Pathway
smay03420
Nucleotide excision repair
smay03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K0H60_02670 (uvrD)
03430 Mismatch repair
K0H60_02670 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smay03400
]
K0H60_02670 (uvrD)
Enzymes [BR:
smay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K0H60_02670 (uvrD)
DNA repair and recombination proteins [BR:
smay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K0H60_02670 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
K0H60_02670 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
QYK09625
LinkDB
All DBs
Position
592301..594469
Genome browser
AA seq
722 aa
AA seq
DB search
MDVSSLLDGLNDKQREAVAAPQSSMLVLAGAGSGKTRVLTHRIAWLMQVEQQSPYSILAV
TFTNKAAAEMRERVEKVAGTNMGRMWIGTFHGLAHRLLRTHFQDAGLPQSFQILDSDDQL
RLLKRILKSLNLDEKQYPPRQAQAYINGKKDQGLRPKHIDAGGFPIEQNLLKIYQVYQES
CDRAGLVDFAEILLRAHELWLNKPHLLAHYQERFKHILVDEFQDTNAIQYAWIRVLAGQT
ANVMIVGDDDQSIYGWRGAQVENLHRFLRDFPTATTIRLEQNYRSKGNILKASNALIANN
PERLGKELWTDEADGEPISLYCAFNEMDEARFIVGRINDWYEKGGNLSDCAILYRSNAQS
RVLEEALLHKGLAYRIYGGLRFFERQEIKDAMGYMRLISNKNDDAAFERVVNTPPRGIGD
RTLDILRSTARQQELTLWQACLRLLDEKVLAGRAASAVRGFMDLIVTLQEETQDMALYRM
TDTVIQASGLKAMYEAEKGEKAHARIENLEELVTAARTFEMPEELEDMGELNAFLSHAAL
EAGEGQADAFTDAVQLMTLHSAKGLEFTMVFMAGVEEGIFPSKMALEEGDRLDEERRLCY
VGMTRAMEKLYITYAESRRIYGREDYARPSRFIKEIPPQYVDEIRLKAQVSTPMANNRFS
AQKSAVANDTGFSVGQRVHHPKFGDGKVTNFEGSGAQARVQVNFSDFGSKWLVVAYARLE
AR
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggacgtatcttctttactagacggcctgaatgataaacagcgcgaggctgtcgcggca
ccgcaatccagcatgttagtgcttgcgggcgcaggcagtggcaaaacgcgagtattaact
caccgtatcgcgtggttaatgcaggtcgaacagcagagcccttactcgattttagccgtg
acctttaccaataaagccgcagccgagatgcgtgagcgggtggagaaggtcgctggcacc
aatatggggcggatgtggattggtaccttccacgggttagcgcatcgtctgttacgcact
cacttccaagatgcgggattaccgcagagcttccaaattctcgattcggacgatcaactg
cgtttgctgaaacgcatccttaaaagtttgaatctggatgaaaaacaatatcctccccgt
caggcgcaggcctatatcaatggcaagaaagaccaaggtttgcggcccaagcatatcgat
gcgggtggctttccgattgagcaaaacctgctgaagatttatcaggtttatcaagaatct
tgcgaccgcgcgggcttagtcgactttgccgaaatcctgttacgtgcccacgagctgtgg
ctcaataaaccgcatttactggcgcattatcaggagcgttttaagcatattctggtggac
gagttccaggatactaacgccatccaatatgcgtggatccgtgtgttggcaggccaaact
gccaacgtgatgatagtgggtgacgacgaccaatctatttacggttggcgcggcgctcag
gttgaaaacctgcaccgcttcctgcgggatttcccgacggcgactacgattcgcctcgag
caaaattatcgctccaagggcaatattttgaaggcgtcaaacgcgcttatcgccaataac
cccgagcgtttaggtaaagagttgtggaccgacgaagcagatggtgagccgatttccctc
tactgcgcctttaacgaaatggacgaggcgcgctttattgtcggccgtatcaatgattgg
tacgaaaaaggcggcaatttaagtgactgcgcgattttatatcgctcaaacgctcagtcg
cgtgtgctcgaagaagccttattacacaaaggtttagcctatcgtatttacggtgggctg
cgcttcttcgaacgccaagagattaaagacgctatgggttatatgcgtcttatcagcaat
aaaaatgacgatgccgccttcgagcgcgtggtcaatacaccgccccgtggcattggcgat
cgcaccttagatattctgcgttcgaccgcccgtcagcaggaactcaccctgtggcaggct
tgtttacgtttgctggatgaaaaagtgctggctggccgcgccgcctctgcggtgcgtggc
tttatggatcttatcgtcaccctgcaggaagaaactcaagatatggcgctgtaccggatg
acggacacagtgatccaagcctctgggcttaaggccatgtacgaggcggaaaaaggcgaa
aaggcccacgcccgtatcgaaaacttagaggaactcgttactgcggcgcgcaccttcgaa
atgccagaagagcttgaggatatgggcgagcttaacgccttcttatcccacgcggcctta
gaggcgggcgaaggtcaggccgatgcctttaccgatgccgtacagttaatgacactgcac
tcggccaaggggcttgagtttaccatggtgtttatggcgggcgtcgaggaggggattttc
ccgagtaagatggcgctcgaagagggcgacagactcgatgaggaacgccgcctctgttac
gtgggcatgacccgcgcgatggaaaaactctatatcacctatgccgaatcccgccgtatt
tatggccgtgaagattatgcccgtccatcgcgttttattaaggagattccgccgcaatat
gtggacgaaattcgcttaaaggcgcaggtgtcaacgccgatggccaataatcgcttcagt
gcgcaaaagtcggcggtcgccaacgatactggctttagcgtcggccaaagggtgcatcat
ccaaaatttggtgacggcaaagtgactaactttgagggcagtggcgcacaggcgcgggtg
caggtgaattttagtgattttggcagtaagtggttggtggtcgcctacgcgcgtttagag
gcgcgttga
DBGET
integrated database retrieval system
