Shewanella mangrovisoli: K0H60_03240
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Entry
K0H60_03240 CDS
T09316
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
smay
Shewanella mangrovisoli
Pathway
smay03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
smay00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
K0H60_03240 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smay03019
]
K0H60_03240 (orn)
03009 Ribosome biogenesis [BR:
smay03009
]
K0H60_03240 (orn)
Messenger RNA biogenesis [BR:
smay03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
K0H60_03240 (orn)
Ribosome biogenesis [BR:
smay03009
]
Eukaryotic type
Pre-60S particles
RNases
K0H60_03240 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Glyco_hydro_77
pP_pnuc_1
Motif
Other DBs
NCBI-ProteinID:
QYK09734
LinkDB
All DBs
Position
729955..730500
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AA seq
181 aa
AA seq
DB search
MAADANNLIWIDLEMTGLEPDVDRVIEIATLVTDQELNIIGQGPVIAIHQSDDVLAAMDD
WNQKHHGESGLIDRVRASQVNEAQAVAQTIAFLEQYVPKGASPMCGNSVGQDRRFLNRYM
RELEDYFHYRNLDVSTVKELVKRWSPETMAGFKKQNTHQALQDIQESIAELQYYRSKVFK
I
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggacgcgaataatctcatttggatcgatctcgaaatgacagggttagaaccc
gatgtcgatagagtcattgaaattgctaccttagtaacagaccaagaactcaatattatc
ggtcaggggcctgtgattgctattcatcaatcggatgatgtgctggcggccatggatgat
tggaaccaaaaacaccacggtgaatcgggtctgatagatagagtgcgtgctagccaagtg
aatgaagcacaagcggttgcacaaaccatcgcatttttagagcaatatgtgcctaagggc
gcttcacctatgtgcggtaacagcgtgggtcaggaccgtcgcttcttaaatcgttatatg
cgtgaactggaggactacttccattaccgcaatctcgacgtgagcacggtaaaagagtta
gtgaagcgttggagcccagaaaccatggcgggtttcaaaaagcaaaatactcaccaagcg
ctgcaagatatccaagagtcgatcgcggaattacagtattaccgcagcaaagtatttaaa
atttga
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