Shewanella mangrovisoli: K0H60_03850
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Entry
K0H60_03850 CDS
T09316
Symbol
dnaB
Name
(GenBank) replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
smay
Shewanella mangrovisoli
Pathway
smay03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
smay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K0H60_03850 (dnaB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smay03032
]
K0H60_03850 (dnaB)
Enzymes [BR:
smay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
K0H60_03850 (dnaB)
DNA replication proteins [BR:
smay03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
K0H60_03850 (dnaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
ATPase
AAA_33
divDNAB
GvpD_P-loop
DUF1421
nSTAND3
DUF5410
Gal-bind_lectin
Motif
Other DBs
NCBI-ProteinID:
QYK09847
LinkDB
All DBs
Position
862242..863648
Genome browser
AA seq
468 aa
AA seq
DB search
MSQQGAFKPKNKPTDVQVDSLKLPPHSIEAEQSVLGGLMLDADAWDKVAETVVKEDFYSR
SHRMIFAAMHRLVESGQPIDLITVSEQLEVENQLEEAGGFAYLGEIAKNTPSAGNIVSYA
EIVRERAVVREMIRVAHEIADAGYNPEGRDSSALLDLAESKVFKIAEQRTNANEGPEGIK
TILEKTVDKIEQLYNNPHNGVTGVSSGFSDLDRMTAGFQSGDLIIVAARPSMGKTTFAMN
LCEQAAMNEDKPVLIFSLEMPSEQIMMRMLASLGRVDQTKIRTGQLDDEDWARVSSTMGI
MLEQGKMYIDDGSGLTPTEVRSRARRIAREYGGLSMIMVDYLQLMQVPALSDNRTLEIAE
ISRSLKALAKELEIPVIALSQLNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEV
YNNDSPDKGTAEIIIGKQRNGPIGRVRLTFQGQFSRFDNYAGPQFEED
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaacaaggtgcgtttaaacctaagaataagccgacagatgtgcaggtcgatagc
ttaaagctgccgccgcattcgatagaggctgaacaatcggtcttaggtggcctaatgtta
gacgccgacgcttgggataaagtggccgagactgtggtgaaagaggatttttattcccgc
tcgcaccgaatgatttttgcagccatgcaccgtttggtcgaaagtggtcaacccatcgac
ttaattacggtttctgaacagcttgaagttgaaaatcagcttgaagaagcgggcggcttt
gcctatttaggcgagattgccaaaaacaccccgagcgcgggtaacattgtttcctacgcc
gagatcgtgcgcgagcgcgccgtggtgcgggagatgatccgtgtcgcccatgagattgcc
gatgcgggttacaatcccgaagggcgtgattccagcgccttgctcgacttggccgagagt
aaagtctttaagattgccgagcagcgcacaaatgccaacgaaggtcccgaaggcattaaa
accattctcgaaaaaaccgtcgataagattgagcagctctacaacaatccacacaacggt
gtgactggggtgtcgagcggctttagcgatcttgaccgcatgacagcgggcttccaatcc
ggcgacttgatcatcgtcgcggcgcgtccttctatgggtaaaaccaccttcgcgatgaac
ctgtgtgaacaggcggcgatgaatgaagacaagcctgtgctgattttcagtctcgagatg
ccctcggaacagatcatgatgcgtatgttggcctccttgggccgcgtcgaccaaaccaaa
atccgtactggacaactcgatgatgaggattgggcgcgggtatcctcgaccatggggatt
atgctcgagcagggcaagatgtatatcgacgacggttcaggcttaacgccgaccgaagta
cgcagccgtgcccgccgtattgcccgtgagtatggcgggttgtcgatgatcatggtcgac
tacttgcagctgatgcaagtgccggccttatcggacaaccgtaccctagaaattgccgaa
atctctcgctctctcaaggcattggctaaagagttagagatccccgtgattgcactgtcc
cagcttaaccgctcgctcgaacaacgtgccgataagcgcccagtaaactcggacttacgt
gaatcgggttctattgagcaggatgcggacctcatcatgtttatttaccgtgatgaggtg
tataacaacgattctcccgataagggcaccgcagaaatcattatcggtaagcagcgtaac
ggccccattggacgtgtgcgcttgaccttccaaggccagttttcccgttttgataattac
gctggcccgcagtttgaagaagattaa
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