Shewanella mangrovisoli: K0H60_05255
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Entry
K0H60_05255 CDS
T09316
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
smay
Shewanella mangrovisoli
Pathway
smay00550
Peptidoglycan biosynthesis
smay01100
Metabolic pathways
smay01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
smay00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
K0H60_05255 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
K0H60_05255 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
smay01011
]
K0H60_05255 (mrdA)
Enzymes [BR:
smay01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
K0H60_05255 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
smay01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
K0H60_05255 (mrdA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QYK10116
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All DBs
Position
complement(1194341..1196197)
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AA seq
618 aa
AA seq
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MSPKKRITMHDHAAEASLFKRRALFTFFCVVALLSVLVTNLYHLQVESYKDYATRSNDNR
IRVVPIAPSRGLIYDRNGVLLAENQPFYSLDLVPEKIANMSETLDELGKLIEITPDERET
FTDALKFHRRFKPLTLKNQLTEEQVAIFSVNQHRFPGISVEAGLKRNYPYASQLTHVLGY
VGKINTRDRAQLERNDQWKNYAATKDIGKQGIEKFYESLLHGTPGHLEEEVNNRGRTIRT
LKIVPPEPGQDIYLTLDLQLQQKAVELLQGHRGSIVAIDPRDGGILALVSSPSYDPNQFV
QGINSKDYSDLLNDKSRPLINRATQGQYAPASTVKPIIALLGLDEKAVTEHTRIWDPGFW
QIPGVERKYRDWKRWGHGWVNVYSAIVESCDTYFYELAYKIGVDPIARFMEQFGFGQNTG
VDIFEESAGNMPSKDWKRLKYNQAWYIGDTISVGIGQGYWTATPLQLASATAILANDGRR
FPPHLLKSIKDNTAKIDSPINELPPIELKNPRNWKIINEAMRQTAHKSRFTDASYTAAMK
TGTAQVIGVAENTKYDANKIAEHFRDNALVVAYAPFEDPKIVLAVVMENAGWGGANAGPV
ARAMLDEYMLRDTWKPTP
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgccaaaaaagcggataaccatgcacgaccacgccgccgaggcgtcactgtttaag
cgccgtgcgctgttcacttttttttgtgttgtcgccctcttgagcgtgttggtgaccaat
ctttatcaccttcaggttgaatcctataaagattacgcaacacgttctaatgacaaccgt
attcgcgtcgtgcccatcgccccaagccgtggcctgatttacgacagaaacggcgtactt
ctcgccgaaaaccaacccttttactccctcgatctggtgccagagaaaattgccaatatg
tccgagaccttggacgagctaggcaagttaatcgagatcaccccagatgagcgcgaaacc
tttaccgacgccttaaagtttcaccgccgctttaagccgcttacccttaaaaatcagctg
actgaagagcaagtggcgatttttagcgtgaaccagcatcgctttcccgggatttccgtc
gaggcgggtttaaagcgtaactacccctatgctagccagctcacccatgtgctgggctat
gtgggcaaaatcaacacccgcgatcgcgcccaattggagcgtaacgatcaatggaagaac
tatgccgcaaccaaggatattggtaagcaaggcattgaaaagttttatgaatctctgctg
cacggtacgccaggtcacctcgaagaagaagtgaacaaccgcggccggactatccgcacc
cttaaaatcgtgccgccggagccggggcaagatatttacttgaccctagatttgcaattg
cagcaaaaggccgtggaattactccaaggtcaccgtggctcgattgtcgctatcgacccg
agggacggcggcatcttagccttagtctcaagcccaagttacgaccctaaccagttcgtc
caagggattaacagcaaagattacagcgatttattgaacgataaatcccgcccactgatt
aaccgtgccacccaaggccaatatgcaccggcctcgacggtcaaacccataatcgcccta
ctggggttagatgaaaaggccgtcaccgagcacacccgtatttgggaccctggcttttgg
caaatccccggcgttgagcgtaaataccgcgactggaaacgttggggccatggctgggtg
aacgtttacagcgccatcgtcgaatcctgcgatacctacttctatgaattggcttataaa
atcggtgtagaccctattgctcgctttatggaacagttcggctttggacaaaataccggt
gtcgatattttcgaagaatcggcgggcaatatgccgtcgaaggactggaaacgcttaaaa
tacaatcaggcttggtacattggtgacacgatttccgtcggtatcggccaaggttactgg
accgcaacgccattgcaattggccagcgccaccgccatcctcgccaatgatggccgccgc
ttcccgccacatttgttaaagtcgattaaagataatacggccaaaattgactcgccaatt
aacgagttgccgccaattgagcttaaaaacccgcgcaactggaaaatcatcaacgaagcc
atgcgccagacagctcataagtcgcgttttaccgacgccagttacacggccgcgatgaaa
accggtacggcgcaggtgattggcgtggccgaaaacactaagtacgatgccaacaagatt
gctgagcatttccgcgataacgccctcgtcgtcgcctacgcaccctttgaagatccgaaa
atcgtcctcgcggtggtgatggaaaacgccggctggggtggcgcaaacgcagggccagtc
gcccgcgccatgctcgatgaatacatgctaagagacacttggaaaccaacgccatga
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