Shewanella mangrovisoli: K0H60_05470
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Entry
K0H60_05470 CDS
T09316
Symbol
nusA
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
smay
Shewanella mangrovisoli
Brite
KEGG Orthology (KO) [BR:
smay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smay03021
]
K0H60_05470 (nusA)
03009 Ribosome biogenesis [BR:
smay03009
]
K0H60_05470 (nusA)
Transcription machinery [BR:
smay03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
K0H60_05470 (nusA)
Ribosome biogenesis [BR:
smay03009
]
Prokaryotic type
rRNA transcription factors
K0H60_05470 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_NusA_C
DUF2187
Glyoxalase_4
S1_RRP5
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
QYK10147
LinkDB
All DBs
Position
1229668..1231167
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AA seq
499 aa
AA seq
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MNKEILLVAEAVSNEKAVPREKIFEALETALATATKKKYEGDIDVRVSIDRKTGAYETFR
RWMVIDDNGVALENPYREITLEAARYENPEIQPGDYIEDQIESVAFDRITTQTAKQVIVQ
KVREAERAQVVEQFQDKEGELITGVVKKATRESVVVDLGNNADGVLFREDLISRESFRPG
DRVRALLYSVRPEARGAQLFLTRTKPDMLIELFRVEVPEIADELIEVMGAARDPGARAKI
AVKSNDRRIDPIGACVGMRGARVQAVSNELGGERVDIVLWDDNPAQYVINAMAPADVASI
IVDEDNHSMDIAVEAESLAQAIGRNGQNVRLATQLTGWELNVMTVEDMNKKHQAESAKVK
SLFMEALDVDEDFAQVLADEGFTSLEEVAYVPVSELLAIDGFDEDIVEALRERAKAAIST
RALASEEALDGVEPSEELLALEGVERHLAYVLASKGIVTLEDLAEQGIDDLIEIEELTEE
KAGALIMAARNICWFGEEA
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagagattctgctagtcgctgaggcggtttcaaatgaaaaggccgttccacgc
gagaaaatttttgaagcgctagaaactgcgctggcaactgcaaccaagaaaaaatacgaa
ggcgatatcgacgttcgtgtttctatcgaccgtaaaactggcgcctatgaaactttccgc
cgctggatggttatcgacgataacggtgttgcgttagaaaacccataccgcgaaatcacc
ttggaagctgcgcgttacgaaaacccagaaatccaacctggcgattacatcgaagatcag
atcgaatctgttgcgttcgaccgtattacgacccaaaccgctaagcaagtcatcgtacaa
aaagtacgtgaagcagagcgtgctcaagtcgttgaacagttccaagataaagaaggcgag
ctgatcactggtgtggtgaaaaaagcgacccgtgaaagcgtggtagttgacttaggtaac
aacgctgatggcgtattgttccgtgaagatttaatttcacgtgaatctttccgtcctggt
gaccgcgtacgtgctctgctgtactcagtacgtccagaggctcgtggcgcacagttattc
ttaactcgcactaagccagacatgctgattgagctgttccgtgttgaagtaccggaaatt
gccgatgagcttattgaagtgatgggcgctgcgcgcgacccaggtgcacgcgctaagatt
gctgtgaaatcaaacgaccgtcgtatcgacccaatcggtgcttgcgtcggtatgcgtggc
gcacgcgtacaagcggtttcgaatgaactgggtggcgagcgtgtcgatatcgtgttgtgg
gatgataatccagcacaatatgtgatcaacgcaatggcgcctgccgatgtggcttctatc
atcgttgatgaagacaaccactcaatggatatcgccgttgaagcggaaagtctggcacaa
gccattggccgtaatggtcaaaacgtgcgtttagcgactcaactgactggttgggaactg
aacgtgatgacagtggaagacatgaacaagaagcaccaagccgagagcgctaaggtgaag
agcctattcatggaagcactggatgtagatgaagattttgctcaagtactggctgacgaa
ggctttacttctctcgaagaagtggcttacgtacctgtatctgaattattggcaattgat
ggcttcgatgaagatatcgttgaagcattacgtgagcgtgcaaaagcggcgatctcaact
cgagctctcgcctctgaagaagcactagatggtgtggagccaagtgaagagttattagca
cttgaaggtgttgaaagacacttagcctatgttttagcaagcaaaggtatcgtgactcta
gaagacttggctgaacaaggcattgatgatttgatcgaaattgaagaattgacagaagaa
aaagcaggtgcgctgatcatggctgcccgcaacatctgttggtttggcgaagaagcataa
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