Shewanella mangrovisoli: K0H60_05485
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Entry
K0H60_05485 CDS
T09316
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
smay
Shewanella mangrovisoli
Brite
KEGG Orthology (KO) [BR:
smay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smay03016
]
K0H60_05485 (truB)
Enzymes [BR:
smay01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
K0H60_05485 (truB)
Transfer RNA biogenesis [BR:
smay03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
K0H60_05485 (truB)
Prokaryotic type
K0H60_05485 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QYK10150
LinkDB
All DBs
Position
1234365..1235318
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AA seq
317 aa
AA seq
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MARRSKGRFIDGIVLLDKATGMSSNFALQRVKRFFNANKAGHTGALDPLATGMLPVCLGE
ATKFSQHLLDSDKRYLVTAKLGQRTDTSDSDGEVVQTRPLEFTEAQLMSALEHFRGDTQQ
VPSMYSALKYQGQPLYKYAREGIEVPREARPITVFELNFIALEGDELTLDIHCSKGTYIR
TIIDDLGEILGCGAHVIMLRRTQVAHYPYDKMVTLEQLEALVAKAQEEQLDPSSLLDSLL
LPMDTAVADFPEVNVPDASAAYLMQGQAVRVPGLVADTLVRITLGTERRFVGIGEMNEDG
LLAPKRLVVNHDQAKAS
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggcgagacgttcgaagggccgctttatcgacggtattgtgttgttggacaaagccact
ggcatgagctccaacttcgcattacaacgggtaaagcgcttttttaatgccaacaaagca
gggcacacgggagcactcgatcccttggctacgggtatgctacctgtgtgtttaggcgag
gcgactaagttttcgcagcatttactggattcggataagcgttatctggttaccgcaaaa
ctgggacaacgcacagatactagcgactctgacggtgaagtggtgcagactcgcccgctc
gagttcactgaggcgcagttaatgtccgccttagaacatttccgtggcgatacccagcaa
gtgccctccatgtattcggcgctgaaataccaaggccagcctttgtataagtatgcccgc
gaggggattgaagtaccgcgcgaggcgcgtccaatcacagtatttgagctgaacttcatc
gctctagaaggcgatgagctgaccttagacattcattgctctaagggcacgtatattcgc
actatcatcgatgatttaggcgaaattcttggttgtggtgcccatgtgattatgttgcgt
cgtactcaagttgcccattatccctacgacaaaatggtcactcttgagcagctcgaagcc
ttagtcgctaaggcgcaggaggagcagcttgacccaagcagcttgctggattcgctgttg
ctgcctatggatacggcggttgccgactttcccgaggtcaatgtgccagatgcgagcgct
gcttacttaatgcaaggtcaggcggtacgagtccctgggctcgttgcagatacactggtg
cgcattacgttgggcactgagcgtcgtttcgtcggcattggcgagatgaacgaagatggt
ttactggcgcctaagcgcttagtcgtgaaccacgaccaagctaaagcatcttaa
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