Shewanella mangrovisoli: K0H60_05985
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Entry
K0H60_05985 CDS
T09316
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
smay
Shewanella mangrovisoli
Brite
KEGG Orthology (KO) [BR:
smay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smay03021
]
K0H60_05985 (rpoS)
Transcription machinery [BR:
smay03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K0H60_05985 (rpoS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Put_DNA-bind_N
Motif
Other DBs
NCBI-ProteinID:
QYK10245
LinkDB
All DBs
Position
1359090..1360070
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AA seq
326 aa
AA seq
DB search
MSRINSTAAEELVDFSVDTAEFDLDKEDIAADLVQELGLEQQVQDDLQKNLDATQLYLGE
IGFSPLLSAEEEVYFSRKALKGCEKSRNRMIESNLRLVVKIARRYNNRGLALLDLIEEGN
LGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHVVKELNVYLRTARE
LAQKLDHEPTAEEIAEKLQVSSVDVSRMLKLNEKITSVDIPLGGDNDKALLDVLADDDNV
GPDYKVQDEDISNSVVKWLNELNTKQREVLARRFGLLGYEPSTLEDVGAEIGLTRERVRQ
IQVEALKRLRDLLGAQGLSVEALFRN
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcataaatagcactgccgcagaagaactagtagatttttccgtagataccgca
gagtttgatctcgataaagaggatattgccgctgatttagttcaagaactaggactcgaa
caacaggttcaagatgacctgcaaaaaaatcttgatgccacccagctctatttaggtgaa
atagggttttccccactgcttagcgcagaagaagaagtttacttttcccgtaaggcctta
aaaggctgcgaaaaatcccgtaatcgcatgattgagagtaacctgcgactcgtggttaaa
attgcccgtcgttacaataatcgtggcctagcgctgctggatttaatcgaagagggtaat
cttggcttgatccgtgcggtggaaaaattcgacccagaaagaggcttccgtttctcaacc
tatgcgacttggtggatcagacaaacgattgaacgtgccatcatgaatcaaacccgcacg
attcgcttgccaatccatgttgtaaaagaactcaacgtgtatttacgtacggctcgggaa
ttagcgcaaaaacttgaccacgaacctacggcagaagaaattgccgagaaactgcaagta
tccagtgttgacgtcagccgcatgctgaagctcaacgagaagatcacctctgtcgatatc
cccttaggtggcgataacgacaaggcgttactcgatgtgctcgccgatgacgacaacgta
ggcccggactacaaagtacaagatgaagacatttcaaactcagtggtgaaatggcttaac
gaactgaataccaagcaaagagaagtgttagcgcgccgctttggtttgttaggttatgaa
ccctcaacccttgaagacgtcggtgctgaaattggcctcacccgtgaacgtgttcgccaa
attcaagtggaagccctaaaacgcctacgtgatttgctgggtgctcaaggtctctccgta
gaggcactttttagaaactaa
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