Shewanella mangrovisoli: K0H60_06235
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Entry
K0H60_06235 CDS
T09316
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
smay
Shewanella mangrovisoli
Brite
KEGG Orthology (KO) [BR:
smay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smay03400
]
K0H60_06235 (phrB)
Enzymes [BR:
smay01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
K0H60_06235 (phrB)
DNA repair and recombination proteins [BR:
smay03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
K0H60_06235 (phrB)
Prokaryotic type
K0H60_06235 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QYK10284
LinkDB
All DBs
Position
1413747..1415228
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AA seq
493 aa
AA seq
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MSDNQTPAAKHALMWFRQDLRLTDNQALTAACDWVRQAPGAKLRAIYIATPSQWLSHDMA
PIQIDFIQRHVNLLAQGLASLGIEFELIQLDSFKEVPAFLASYCEKLGVERVFAGREPEI
NEQKRDQACLDAGITLVLSDEHCLLPPGTVLNLSGEMYKVFTPFSRKWREVAAKRAILPL
GVPAPLGPMLPEPKPFSFKERFQSTSKLTSSEQWAAGEGQAKRILTAFIQQKAQDYKQDR
DFPALDGTSVISPYLALGVLSPRQCIAALLGCFPEVIVDDTSPGRTWLNELIWREFYRHL
LVAFPDLSKGHNFNRQADHVQWRNNQAEFLAWCEGKTGYPIVDAAMRQLNQTGWMHNRLR
MVVASFLTKHLLIDWRWGERYFRQHLIDGDLAANNGGWQWSAGCGCDAQPYFRIFNPISQ
SEKFDPDGSFIRKYLPELASWGIKRLHQPNMQKTPSLFEAPLLESDSAYPCAIVEHNAAR
ARALAVLGVLKKA
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataatcaaaccccagcggcaaagcacgcgttgatgtggtttcgccaagacctg
cgtctaacggataaccaagcgctgacggccgcctgtgattgggtgcggcaagcgcctggc
gcaaaacttagggcgatttatattgcgactccgagccagtggctcagccacgatatggcg
ccgatccagattgattttatccagcggcatgtgaatttacttgcccaaggactcgcaagc
ctagggattgaatttgagcttattcagctcgatagctttaaagaggtgcccgccttttta
gcgagttactgtgaaaagcttggggttgagcgggtatttgcggggcgagaacccgaaatc
aacgagcaaaagcgcgaccaagcctgtctcgatgcgggtatcaccttagtgctcagcgac
gaacactgcctattgccgccgggtacagtgcttaacttaagcggtgaaatgtataaggtg
tttacgccctttagccgcaagtggcgagaagttgccgccaaacgcgctattttgccgctt
ggggtgcctgcaccgcttggccctatgttacctgaaccaaagccattcagttttaaagaa
cgttttcaatcaacaagcaagctaacctcgagcgagcaatgggcggcgggagagggacag
gcaaagcgcatccttaccgcatttattcagcaaaaagcccaagactataagcaggatagg
gactttccagctctcgatggtaccagtgttatctccccttatttggcgctgggtgtgctc
agcccaaggcaatgtatcgcggcgctgcttgggtgttttcccgaggtgattgtcgatgat
actagccctggacgaacctggttgaatgagcttatctggcgggagttttatcgccatttg
ttggtggcttttccagatttatccaaggggcacaactttaatcgtcaggccgatcatgtg
cagtggcgtaacaaccaagctgagtttttagcgtggtgcgagggcaaaactggttatccg
attgtggatgcggcgatgcgccagctcaatcaaactggctggatgcacaatcggctgcgc
atggtggtggcgagctttttaaccaaacacttgcttatcgattggcgctggggtgaacgc
tattttcgccagcaccttatcgacggcgatctggcggccaataacggtggctggcaatgg
tcggctggctgtggctgtgatgctcagccttatttccgcatttttaatcccatcagccag
agcgaaaagtttgatccagatggcagctttatccgtaagtacttaccagagctggcatct
tggggaatcaagcgtttgcatcaacccaatatgcaaaaaacgccttcgttatttgaggcg
ccactgctggagtctgactcggcttatccctgtgcgattgtggagcacaatgcggcaagg
gcgagggcgctggcggtacttggggtgctgaaaaaggcctaa
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