Shewanella mangrovisoli: K0H60_07835
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Entry
K0H60_07835 CDS
T09316
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
smay
Shewanella mangrovisoli
Pathway
smay03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K0H60_07835 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smay03400
]
K0H60_07835 (xthA)
Enzymes [BR:
smay01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
K0H60_07835 (xthA)
DNA repair and recombination proteins [BR:
smay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
K0H60_07835 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
DUF3014
Motif
Other DBs
NCBI-ProteinID:
QYK10570
LinkDB
All DBs
Position
complement(1754359..1755171)
Genome browser
AA seq
270 aa
AA seq
DB search
MKIVSFNINGLRSRLHQLQALIDSHQPDIIGLQETKVHDEAFPLAEVEAMGYHVHYHGGK
AHYGVAMLSKVAPLKVQKGFATDEEDAQRRMIIGTFAQANGRPLTVLNGYFPQGESIDHP
TKYPAKRKFYQDLMAHLHANHSNDEDIAIIGDINISPIDLDIGIGEVNRKRWLKTGKCSF
QPEEREWLKTLQDWGLVDTFRQLHPDRCERYSWFDYRSKGFDDNRGLRIDVILATPSLAA
RLVESDVDYELRGIDKPSDHAPIWSTFKEA
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgtttctttcaatatcaatggattgcgttctcgcctgcatcaattgcaagcg
ttaatcgacagccatcagcccgacattatcggcctgcaagaaaccaaagtgcacgatgaa
gccttcccgctcgccgaagtcgaggccatgggctatcacgtgcattaccacggtggcaag
gcacactatggcgtagccatgctctccaaagtcgccccacttaaggtgcaaaagggtttt
gcaactgatgaagaagatgcgcagcgccgcatgattatcggcacctttgctcaggcaaat
ggccgcccgctaactgtgttgaatggttatttccctcagggcgaaagcatcgaccatccg
acaaaataccctgctaagcgtaagttttatcaggacttaatggcgcatttgcacgctaat
catagcaacgatgaagatatcgccatcattggggatatcaatatttcgcccatcgatttg
gatatcggcatcggtgaagttaaccgcaaacgttggctaaaaaccggtaaatgcagcttc
caacccgaagagcgtgaatggctgaaaaccctgcaggattggggattggtggataccttc
cgtcaactgcaccccgaccgctgcgagcgttattcatggttcgattaccgcagcaaaggc
ttcgatgataaccgtggcctacgcatcgatgtgatcttagcgacgccgtcactggccgca
cgtttagttgaatccgacgtcgattacgagctgcgcggtatcgacaaaccctcagatcac
gcgccaatttggagcacctttaaagaagcctaa
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