Shewanella mangrovisoli: K0H60_08185
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Entry
K0H60_08185 CDS
T09316
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
smay
Shewanella mangrovisoli
Pathway
smay03030
DNA replication
smay03430
Mismatch repair
smay03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K0H60_08185
03430 Mismatch repair
K0H60_08185
03440 Homologous recombination
K0H60_08185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smay03032
]
K0H60_08185
03400 DNA repair and recombination proteins [BR:
smay03400
]
K0H60_08185
Enzymes [BR:
smay01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K0H60_08185
DNA replication proteins [BR:
smay03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K0H60_08185
DNA repair and recombination proteins [BR:
smay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K0H60_08185
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
CAF1
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
QYK10639
LinkDB
All DBs
Position
1847673..1848359
Genome browser
AA seq
228 aa
AA seq
DB search
MGPWWVNAKLRWRALRCQHRLFKDYYQSLVPLLELPISRAPLMAMDLEMTGLNPLQDQIL
SIGLVPIENGAIPLMGAQQKLVQIQGSVGQSATIHGILDNHLTEAVTIEEAMAWFVAQTR
GHVLVAHHSPLDCRFLQQDILSIYHQAIVLPAIDTLLLEKHRLLREHSVLKEGSLRLGAC
RERYGLPIYGAHSALTDALACGELLLAQVASMGGAEELKVGELLAYSR
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggggccttggtgggtgaacgcaaagctgcgctggcgtgcgctacgctgtcagcatcgg
ctatttaaggactattaccaatccttagtgccgctgttggaattacccattagccgggcg
cccttgatggcgatggatttggagatgacaggcctcaaccccttacaggaccaaatctta
agtattgggttggtgccgattgaaaatggggcgattcccttgatgggcgcgcagcaaaaa
ctggtgcaaatacagggtagtgtggggcagagtgcgacaattcatgggatcctcgataat
catttaaccgaggcggtgaccattgaagaagcaatggcatggtttgtggcgcaaacccgt
ggtcatgtgttggttgcgcaccattcccccctcgattgccgtttcttacagcaagatatc
ttgtcgatttatcatcaagcgattgtactgcctgcgattgataccctactgctggaaaaa
caccgtttgctacgcgaacactcagtgcttaaagaaggcagcttaaggcttggggcatgc
cgtgagcgatatggattgccgatatatggcgcccacagcgccctgactgacgcactggcc
tgcggcgaactgttattggcgcaggtggcaagcatgggcggcgccgaggaattaaaggtg
ggtgaattgttggcttactcacgctaa
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