Shewanella mangrovisoli: K0H60_10015
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Entry
K0H60_10015 CDS
T09316
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
smay
Shewanella mangrovisoli
Brite
KEGG Orthology (KO) [BR:
smay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smay03032
]
K0H60_10015 (gyrA)
03400 DNA repair and recombination proteins [BR:
smay03400
]
K0H60_10015 (gyrA)
Enzymes [BR:
smay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
K0H60_10015 (gyrA)
DNA replication proteins [BR:
smay03032
]
Prokaryotic type
DNA Topoisomerases
K0H60_10015 (gyrA)
DNA repair and recombination proteins [BR:
smay03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K0H60_10015 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
PUA_4
Motif
Other DBs
NCBI-ProteinID:
QYK10976
LinkDB
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Position
2281755..2284511
Genome browser
AA seq
918 aa
AA seq
DB search
MTDLASSISPINIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELKNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYTLVDGQGNFGSVDGDSAAAM
RYTEIRMDKLAHQLLADLEKETVDYVPNYDGTEQIPAVLPTRVPNLLINGSSGIAVGMAT
NIPPHNLTEVVKGCLALIADPALSIEQLMEHIPGPDFPTAAIINGRKGIIDAYKTGRGRA
VMRALAEVETEDNGRERIIVTEIPYQVNKAKLIEKIAELVKDKKIEGISGLRDESDKDGM
RIVIEIKRGEVGEVVLNNLYAQTQMQCSFGINMVALTNGQPKLFNLKEMLECFILHRREV
VTRRTVFELRKARERAHILEALAVALANIDPIIALIKASPTPADAKVKLVEQGWALGHVQ
GMLEKAGDDAARPEWLEPEFGIRDGLYYLTEQQAQAILELRLHRLTGLEHDKIIAEYEEL
LEFIAGLLFILRSPERLMEVIKEELEEILAEYGDARRTVINANEIDMSLEDLINEEDVVV
TLSHLGYAKYQPLSDYQAQRRGGKGKAATKVKDEDFVEKLLVANTHDTILCFSDFGKMYW
LKVYQLPLASRTSRGRPIVNLLPLSDGERITAILPVREYAEDKYIIMATSNGTVKKTALT
AYSNPRANGIIAVNLKDGDQLIGVDITNGDDEIMLFSNEGKVVRFKEGEEVAVLDENGNP
VLDEEGNPQINFKGVRPMGRGATGVRGIKLEEGQRVVSLIVPKGDGAILTVTENGYGKRT
ELSEYPSKSRATKGVVSIKVSERNGAVVGAVQVGGNDEIMLISDKGTLVRTPANGVSIIG
RNTQGVTIIRTASDEKVVGLQRIDEIQGDEDEVELDENGMPIVPVVVEGDSVQEEPLEDE
LEEELDEDEELDDEQDED
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgactgatctggcatcatctatttcgccaattaatatcgaagacgaactaaagaattcg
taccttgattacgccatgagcgtcatcgtgggacgtgcattaccagacgtgcgtgatggc
cttaagcctgtgcatcgccgcgtgctgtttgccatgagtgaattgaagaacgattggaac
aagccgtacaaaaagtctgcccgtgtggttggtgatgtgatcggtaaatatcacccccat
ggtgattcggcggtttacgatactatcgtacgtatggctcagcctttctctctgcgttac
accttagtcgacggtcaaggaaacttcggttcggttgacggtgactccgcagcggcaatg
cgttataccgaaatccgtatggacaagttagcgcaccagctcctcgccgatcttgaaaaa
gaaaccgttgactatgtgcccaactacgatggcacagaacaaattcccgctgtattaccg
acacgtgtccctaacctgttaatcaacggttcatcgggtattgcggtcggtatggcgact
aacattccgcctcataacttaaccgaagtcgttaagggctgtttagcactgatcgccgat
cctgcgttgtctatcgaacagttgatggaacatattccaggcccagacttcccaacggcg
gcgattatcaatggccgtaaaggcattatcgatgcgtataagacgggccgcggccgcgca
gtgatgcgcgcactggctgaagtcgaaaccgaagataacggccgtgaacgcattatcgtc
accgaaattccttatcaggtgaacaaggctaaactcatcgagaaaatcgctgagttagtc
aaagataagaagattgaaggcatcagcggcctgcgcgacgagtctgacaaagacggtatg
cgcatcgttattgaaatcaaacgcggtgaagtgggcgaagttgttctgaacaacctctat
gcccagacacaaatgcaatgttcttttggtatcaacatggtggccttgaccaatggtcag
cctaagttgttcaacttaaaagaaatgctcgaatgctttatcctgcaccgccgtgaagtg
gtgacccgccgtaccgtattcgaactgcgtaaagcgcgcgaacgtgcccatatccttgag
gcattagcggtcgcactcgccaacatcgatccgattattgcgctgatcaaagcctcgcca
accccagctgatgccaaagtcaaactggttgaacagggttgggcacttggccatgtacag
ggcatgcttgaaaaagcaggtgacgatgcggcgcgtcctgaatggttagagccagaattc
ggcatccgtgatggcttatattacctgactgagcagcaggctcaggcaatcctagagctg
cgtttacaccgcttaactggtcttgagcacgacaagatcatcgctgaatacgaagagctg
ctcgagttcatcgcgggtctgctgtttattctgcgcagccctgagcgtttgatggaagtg
atcaaagaagagctggaagaaattctggccgaatacggtgatgcacgccgcactgtcatc
aacgccaacgaaattgatatgagtcttgaagacttaatcaacgaagaagacgtggttgtg
accctgtcacatttaggttacgccaagtaccaaccgctgagcgattaccaagcccagcgt
cgtggtggtaagggtaaagccgctactaaggtgaaagacgaagatttcgttgaaaaactg
ctggttgcgaacacccacgatacaattctgtgcttctcagatttcggtaagatgtactgg
ctcaaggtctatcaattaccgcttgcgagccgcacatcgcgcggtcgtccgattgtcaac
ttactgccgctgtccgatggtgagcgcattacggcgattctaccagtgcgtgaatacgca
gaagataagtacatcatcatggcgacctctaacggtaccgtgaagaagactgcattgacg
gcttacagcaacccacgcgctaacggcattatcgccgtgaatctgaaagacggtgaccag
ctgatcggtgtcgatatcaccaatggtgatgatgagatcatgttgttctcgaacgaaggt
aaagtggttcgctttaaagaaggcgaagaagtggctgttctcgatgaaaacggcaaccca
gtgctggacgaagaaggtaacccacagatcaacttcaagggcgtgcgtccaatgggccgt
ggcgcgaccggtgttcgcggtattaagctcgaagaaggtcaaagagtggtgtctctcatc
gtacctaagggcgatggcgctatcttaaccgtgaccgaaaacggttacggtaaacgtact
gaactgtctgaatacccatcgaagagccgcgcgaccaaaggtgtggtatcgatcaaggtg
agcgagcgtaacggtgcggtggttggcgcggtacaagttggcggtaatgacgaaatcatg
ctgatcagcgataaaggtaccttagtccgtacgcctgcgaacggtgtgtctatcatcggc
cgtaacacccaaggtgtgaccattatccgtaccgcaagtgacgagaaagtggttggtctg
caacgtatcgatgagatccaaggcgacgaagatgaagtcgagctggatgaaaacggtatg
ccaatcgtcccagttgttgttgaaggtgactctgttcaagaagagcctttagaagatgaa
ctggaagaagaattagacgaagacgaagagcttgacgacgagcaagacgaagactaa
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