Shewanella mangrovisoli: K0H60_10045
Help
Entry
K0H60_10045 CDS
T09316
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
smay
Shewanella mangrovisoli
Brite
KEGG Orthology (KO) [BR:
smay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smay03032
]
K0H60_10045 (ihfB)
03036 Chromosome and associated proteins [BR:
smay03036
]
K0H60_10045 (ihfB)
03400 DNA repair and recombination proteins [BR:
smay03400
]
K0H60_10045 (ihfB)
DNA replication proteins [BR:
smay03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
K0H60_10045 (ihfB)
Chromosome and associated proteins [BR:
smay03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
K0H60_10045 (ihfB)
DNA repair and recombination proteins [BR:
smay03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
K0H60_10045 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
ThiS
HU-CCDC81_euk_1
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
QYK10982
LinkDB
All DBs
Position
2291577..2291864
Genome browser
AA seq
95 aa
AA seq
DB search
MTKSELIEKLATRQSQLSAKEVEGAIKEMLEQMATTLESGDRIEIRGFGSFSLHYRAPRT
GRNPKTGSSVELEGKYVPHFKPGKELRERVDAVNV
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaatccgaactgatcgaaaaactcgccaccaggcagtcgcagctgtcggcgaaa
gaggttgaaggcgcaatcaaagagatgttggagcaaatggcaacgacattagaaagcggt
gatcgtattgagatccgtggctttggtagtttctcgcttcattatcgtgcaccgcgtact
ggccgtaatccaaagactggttcatcagttgaattggaaggcaaatacgtcccgcacttt
aagccaggcaaagaactgcgcgaacgcgttgacgcagttaatgtataa
DBGET
integrated database retrieval system
