Shewanella mangrovisoli: K0H60_11210
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Entry
K0H60_11210 CDS
T09316
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
smay
Shewanella mangrovisoli
Pathway
smay03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K0H60_11210 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smay03400
]
K0H60_11210 (recC)
Enzymes [BR:
smay01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
K0H60_11210 (recC)
DNA repair and recombination proteins [BR:
smay03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K0H60_11210 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QYK07417
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All DBs
Position
2562635..2566348
Genome browser
AA seq
1237 aa
AA seq
DB search
MLKLIQSNQMEVLCAHLAAYLRQPLPGAALLQSEHILVQSPGMSTWLRLEIAKQNGIAAA
LEFPLPSSFIWQLCHDLLPNVPKENAFTKAAMTWKLMQLLPRLLDEPSFGPLRHYLGHSL
DKVESSAADLNSNHQLGAVSADDIKLYQLCGRIADIFDQYLVYRPDWIAAWKANEPLESL
KLNEEQSWQPILWRALIAYNRDELRQSHYHRANLHQDLIAALGDSANSLAKLPQRLFVFG
ISSMAPQTIDVLHQLASRIDVIILSLSPCQHYWGDIIDPRHRARMALQYAGKRQLAEQWE
DKLEVGNPLLANNGKMGRELLDMLLELPPEHCDFGDDVYCEPCGDPNDPHANASMLAGVQ
YDILEMQTLDRVLGPDAELYKEVANRRVLTADDDSIQIKSCHSPLREVETLHDHLLDLLD
SDNQLTPKDIVVMMPDVAAYAPYIDAVFAAKQGLEYIPYAIADRGAAQESPLINSFLNLL
NINQSRFGLTDILSILEVPAILRRFQLEEDELPLIRRWLDEAGVRWGRDEQSRLKQGVPA
FEQNSWAFGIKRLILGYALRDDAPLYQSSPQGMHYLTVAGVEGQSAQALGKLLNFIEVLD
ETTQVLAKAQAPSLRLLELTELLNAFYAPDEDEREQLQEIRDAIAALEQELLAASPADMG
AQANDLDLSIEVLALWFNQRLTESRVGQRYLAGSVNFCTLMPMRSIPFKVVCLLGMNDGA
YPRVQHPVGFDLMAHFGARKGDRSRRLDDRYLFLEALLSAREQLYISYIGRSERDNSERI
PSMLVSELIEYCQLCYLPESLAAEAANVSNEDAQQALLEAIVSHQPLQPFDPKLYQAALA
QTPASNGIKQSYSQQWCPPDSNSQLQHGRFIEAHTQIVLEDGAIGDSETQQDIEPLGEAE
HVDISAFIRFFRNPAQYFFNRTLKVDLNLNIQADDNDEPFSLNALERYLLQAQLLGDALE
QGQNEPSTELLQRLKASGNLPMQPFDDLLLRQYSHDIAPLIGRTLFMRGDVAPRHADIRL
SFELPHTQSVGTQLKAKRVILEGRIDDISPKGLVTCRPGSAHGRDILALYLRHLCLMAAG
VTQPSDLQPSYLLDMGHFHALAPITPALAHAQLANLLLLFYQGQIHPLCFMPRTSLAYAS
AEADEEEDPHTSTDPHKARLEAAQSEWLDEQGELGEGTDPHYQRLFHFPDDFTEAHFGKL
ADDIYRPMLSLYHKDTLAQLEEFALNEAPTATTEGAD
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagttaatccaatccaatcaaatggaagtgctctgtgcccatcttgccgcgtat
ttgcgccagccgctacccggcgcggcgttattgcaaagtgagcatattttggtgcaaagc
cccgggatgtcgacttggttacgccttgaaattgcaaaacaaaatggtattgccgctgcg
ctggaattcccgctaccttcaagctttatttggcaactgtgccacgatttactccccaat
gtccccaaggaaaacgccttcactaaggcggcaatgacctggaagctgatgcagctactg
ccacggctactggatgaaccttcctttgggccactgcgccattatttgggccatagctta
gacaaggtggaatcgagcgcggctgacctcaatagcaaccatcagcttggcgccgtaagc
gccgatgatattaagctttaccaactttgcggtcgcatcgccgatatcttcgaccaatat
ttggtttatcgcccagactggattgccgcgtggaaagccaatgaaccgctcgaatcgctc
aaattgaacgaggagcaaagctggcaacccatcctctggcgtgcgctgattgcctacaac
cgtgatgagctgcgtcaaagccactaccacagggccaatctgcatcaggatttgattgct
gcattgggggatagcgccaattcactcgcaaaattgccgcaacgtttatttgtgtttggg
atctcctccatggcgccccaaactatcgatgtgctccaccagctcgcgagccgcatcgat
gtgattatcttaagccttagcccctgtcagcattattggggcgacattatcgacccacgc
catcgggcgcgaatggcattgcaatatgccggaaaacgccaattagccgagcaatgggaa
gataaactcgaagtcggcaatcccctgctagccaacaatggcaagatgggccgtgaatta
ctcgatatgctgctcgaactgccaccagaacactgtgacttcggggacgatgtgtactgc
gagccctgcggcgatcctaacgatccccacgccaacgccagtatgctggccggggtgcaa
tacgatatcttagaaatgcagacgctcgatagggtactcgggccggatgctgagctatat
aaagaggtcgcgaatcgtcgagtattaacagccgacgatgattcaattcaaatcaagagt
tgccacagcccgcttagggaagtcgaaaccctgcacgatcatttactcgatctgctggat
agcgacaaccaactcacgcccaaagacatagtagtaatgatgccggatgtcgcggcctac
gcgccctatatcgatgcggtgtttgcggccaaacagggactggaatatatcccctacgcc
attgccgaccgcggcgcggcgcaggaatcgccactcattaatagctttttgaatttactc
aatattaatcagagccgcttcggactgaccgatattttaagcattctcgaagtcccagcc
attttgcgacgttttcagctcgaggaagacgagctgccactcattcgccgttggttagat
gaagccggtgtgcgttggggccgcgatgaacagagccgccttaagcagggcgtgcccgcc
ttcgagcaaaactcctgggcctttggcataaaacgcttaatcttaggttatgccttacgg
gacgatgcaccgctatatcaatcatccccgcagggaatgcactatttaaccgttgcaggg
gtggagggccaatcggcacaggctcttggcaagctgttgaactttattgaagtcctcgat
gaaaccacccaagtattagccaaggcgcaagcgccctcattgcgattactcgaactcacc
gaactgttaaatgccttttacgcccccgatgaggatgaacgtgagcagttgcaggagatt
cgcgatgcgattgccgctttagagcaagagctgcttgccgcaagccctgccgatatgggg
gcacaggccaacgacttagatttaagcatcgaagtgctggcgctctggtttaatcaacgc
ttaaccgagtcacgtgtcggccagcgatacctcgcgggcagcgtgaatttttgtacctta
atgccgatgcgctcgattcccttcaaggtggtgtgtctgctgggtatgaatgatggtgcc
tatcctagggtgcaacatccagtgggctttgatctgatggcccattttggtgcgcgcaaa
ggcgatcgctcccgcagattagatgatagatacttgtttttagaagcgttactctcggct
cgggagcagctgtatatcagctatattggccgtagtgaacgggataactcggagcgtatt
ccatctatgctggtctctgagctgattgaatattgccagttatgttatttgcctgaatcc
cttgcggcagaagctgctaatgtcagtaacgaagatgctcagcaggcattgcttgaggct
attgtgagccatcagccgctgcaaccttttgatcctaaactgtatcaagcagcactggcg
caaacgcccgcctctaacgggataaaacagagttatagtcagcagtggtgtccgcccgat
agcaatagtcagttgcagcatggtcgatttattgaagcccatacccagatagtgctcgaa
gatggcgcaattggtgacagtgagacccaacaggatattgagccccttggcgaagcagag
catgtcgatatctcagcctttattcgcttctttcgcaatcccgcgcagtatttctttaat
cgtaccctgaaagtcgatttaaacctgaatattcaagcggatgataacgatgagcccttt
agccttaatgcgttagagcgctatttattacaggctcagctccttggtgatgcgctcgag
caagggcaaaacgaacccagcactgaactgttacaacgccttaaggccagtggtaatttg
ccaatgcagccctttgatgatctgctgctgcgtcaatacagccatgatattgcgccgctg
attggcagaaccctgtttatgcgcggcgatgttgctccccgccatgccgatattcggctc
agctttgagttaccccacactcagagtgtagggactcagttaaaggccaagcgggtgatc
ctcgaaggccgaatcgatgatatcagccctaagggattggtgacttgccgtccaggcagt
gcccatgggcgggacattttagccctgtatttgcgccatttatgtttgatggccgcggga
gtgactcaacctagcgacctgcaacctagctatctgctggatatggggcattttcatgcc
ctcgcgcccattacgccagcgcttgcccatgcgcagctcgccaacttattactgcttttt
tatcagggccaaattcatcccctgtgttttatgccaagaacctccctcgcctatgccagc
gctgaggcggatgaagaggaagacccacacacaagcacagacccgcacaaagcccggctc
gaagcggcgcaaagcgaatggctggacgaacaaggtgaacttggcgaaggcacagatccc
cattatcagcggctgtttcattttcccgacgactttaccgaggcacattttggcaagctc
gccgatgacatctatcggccaatgcttagcctgtatcacaaggataccctcgcccaactc
gaggaatttgccctgaatgaagccccaaccgccacgacagagggagcagactga
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