KEGG   Shewanella mangrovisoli: K0H60_11240
Entry
K0H60_11240       CDS       T09316                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
smay  Shewanella mangrovisoli
Pathway
smay03030  DNA replication
smay03430  Mismatch repair
smay03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:smay00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    K0H60_11240
   03430 Mismatch repair
    K0H60_11240
   03440 Homologous recombination
    K0H60_11240
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:smay03032]
    K0H60_11240
   03400 DNA repair and recombination proteins [BR:smay03400]
    K0H60_11240
Enzymes [BR:smay01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     K0H60_11240
DNA replication proteins [BR:smay03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     K0H60_11240
DNA repair and recombination proteins [BR:smay03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     K0H60_11240
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: QYK07422
LinkDB
Position
2575460..2576098
AA seq 212 aa
MSKTPTYSPANTVVVLDFETSGLSPNQGARAIEIGAVLIEQGQITARFSELMNPGFRINS
FIEDYTGISNQMLAHAAPCAEVMARFAEFIGKHHLVAHNATFDQRFLDAEFSQIGHQYPG
QFGCSLLLARRLYPEAINHQLATLVRHKQLPTNGTYHRALADAEMTGHLWLRMLADLKQG
YAITEPPFSLMQKIMAKTKAEVPKFLRQYARG
NT seq 639 nt   +upstreamnt  +downstreamnt
atgtctaaaacgccaacctattcgcctgccaatactgtggtcgttctcgattttgaaact
tctgggctttcgcccaatcaaggagcacgtgccattgaaattggcgcagtattaattgag
caaggccaaattaccgcgcgcttttctgagttaatgaatccggggtttcggataaacagt
tttattgaagattacacagggatcagtaatcaaatgctcgcccatgcggcgccctgtgca
gaagtcatggcccgctttgctgagtttatcggtaaacatcatttagttgcccacaatgcc
accttcgatcaacgctttctcgatgccgaattttcccagataggccatcaatatcccggc
caatttggttgctcgttactgctggcaaggcgcttatatcctgaggccattaatcatcaa
ctcgcaaccttagttcgccacaaacagttaccgactaacggtacttatcaccgcgccttg
gcagatgcagaaatgaccggacatttatggctgcgcatgctggccgatcttaaacaaggg
tatgcgattactgagccgccctttagcctgatgcagaaaattatggccaagacaaaggcc
gaggtgcctaagtttttgcgccagtacgccagaggttag

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