Shewanella mangrovisoli: K0H60_11640
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Entry
K0H60_11640 CDS
T09316
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
smay
Shewanella mangrovisoli
Brite
KEGG Orthology (KO) [BR:
smay00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
smay01011
]
K0H60_11640
Enzymes [BR:
smay01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
K0H60_11640
Peptidoglycan biosynthesis and degradation proteins [BR:
smay01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
K0H60_11640
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Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
LysM2_CERK1_LYK3_4_5
LysM_OapA
LysM_RLK
LysM2_NFP
HlyD_2
Motif
Other DBs
NCBI-ProteinID:
QYK07497
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Position
2667240..2668793
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AA seq
517 aa
AA seq
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MRVSLYVVVGGFALLTGCQTLDNHQVTKPEAETVTTENTVPQYYLATEPESAQITDVWER
IRQGMQLPVPDKKLVNYYRDWYIKNPKHLEVISERAAPYMYLIVEELEKRHLPIEIALLP
IIESAFDPSASSASAASGLWQFTTPMASHFGLEMNWWYDGRRDVPASTVAALDMLEYLYD
KTNNNWLYAIAAYNSGESRVLNAIKRNEDKGLKTDFWSLDLPKETERYVPQLLALAEVIK
HADEYGITLAPIDNSPSIEVVDIDSQIDLAMAAGLANMTTHELLKLNPGYNRWATAPTGP
HTLVLPIDKSEEFKKALAETESEARVSWLRYTIKSGDSIGAIAKKHHTTVNAIRAANGMK
NNNIVAGRHLIIPVSADDKQLYAMSTSQKLPKKAATSTSGNKLTYQVKSGDTLWQIAQNH
KVSVKQLTAWNHLNKDSKLKMGQKLTIVAPPTQAEAEAEQIRTVSYKVKSGDSLARIASK
FKVTVAELLEWNSLTSSQYIQPGQVLKLVVDESNLNA
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgagagtatcactttatgttgtagtagggggatttgccctactcacaggttgtcagact
ttagacaaccatcaggtgaccaaacctgaagctgaaaccgtcacaaccgaaaataccgtc
ccacagtattatctcgcaaccgaacctgagtcggcgcaaattactgatgtgtgggagcga
attcgtcaaggaatgcaactccccgttcctgacaaaaaattagttaactattatcgcgat
tggtacatcaagaaccccaaacacctcgaagtgatttctgagcgtgcggcgccttacatg
tatttgatcgtcgaagagcttgaaaagcgccatctccccattgagatcgcgttgctaccg
attatcgaaagcgccttcgatcccagtgcatcctcagccagtgccgcctctgggctttgg
caatttacaaccccaatggccagccattttgggttagagatgaactggtggtacgacggt
cgtcgtgatgtgcccgcctccacggtggccgcgttggacatgctcgaatacctgtacgac
aaaaccaataacaattggctttatgcgattgcagcctacaactcgggcgagtctcgcgtc
ctcaatgcgattaaacgcaatgaagataaaggccttaaaaccgatttttggtcactggat
ctgccaaaagagacagagcgttatgtgccacaattgttggccctcgccgaagtgattaaa
catgccgacgaatacggcattacgctagcgccaattgacaacagcccttctattgaagtg
gttgatatcgatagccaaattgacttggccatggcggctgggctcgccaatatgacgacc
catgagctattaaaactcaatcctggatacaaccgctgggccactgcaccgacgggaccc
catacgctagtattgccgattgataagtcagaagagtttaaaaaagcactggccgaaacc
gagagtgaagcccgtgtaagttggctcagatacaccattaaatccggtgacagtatcggc
gccattgctaagaaacaccataccacagtcaatgcgatccgtgcggctaatggtatgaaa
aataacaatatcgttgcgggtagacacctaattattccggtctctgccgacgataaacag
ctgtatgccatgtcaaccagccagaagttacctaaaaaagcggcaacttcaacctctggc
aataagttgacttaccaagtgaaatccggcgataccctatggcaaatcgcgcagaatcat
aaggtatcggtgaaacagctcaccgcttggaaccatttaaacaaagacagtaaattgaag
atgggccaaaaactgaccatcgttgcgccgccaacccaagcggaagcggaagcggagcag
attcgcaccgtcagctacaaggtgaaatctggcgactccttagcgcgtattgccagcaag
tttaaagtgacggttgccgagctgctcgagtggaatagcttaacctcatcgcaatacatt
caacccggccaagtgttaaagctggttgtggatgaaagcaatttaaatgcgtga
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