Shewanella mangrovisoli: K0H60_13190
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Entry
K0H60_13190 CDS
T09316
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
smay
Shewanella mangrovisoli
Brite
KEGG Orthology (KO) [BR:
smay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smay03400
]
K0H60_13190
DNA repair and recombination proteins [BR:
smay03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K0H60_13190
Archaeal homologous recombinant proteins
K0H60_13190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
GTP_EFTU
AAA_21
cobW
Motif
Other DBs
NCBI-ProteinID:
QYK07777
LinkDB
All DBs
Position
complement(2983611..2986667)
Genome browser
AA seq
1018 aa
AA seq
DB search
MKPLTLSMSAFGPFASTQTIDFTELGDNPLFLINGPTGAGKTTLLDGICFALYGKTTGNE
REGSQMRCDMADDNLLTEVTFSFQLGSTGYRIRRVPEQERLKKSGDGSTVQKSEAQLYKI
APDGSETLIVASKVSDATAEIEALTGLDVEQFRQVMVLPQGKFRELLMADSKAREQIFSQ
LFQTHIYKRIEDTLKAKAADIRNLVKEQRARRDGILQTAALTSDDELAAEFSHIEPEFAA
ATAAKEQSVAAHLAALKQRDSAQQLFAEFTRLQELQVEALHLNEQQAQIATQTTRLDVAK
QALRVKHLLDNALSREQEASLAAAQRDSAQSTFDAAKLALAHAETAAQEIIPLEHKLREV
EQQYSHLSALVPQLAEFASLEQALAQAKEILQHTKLQGQESKNALATLVEQRSHCENQLP
ALQQQSEQQLATAQALQQYRHMLEQFKQWQQICAKVAHTQGLLEQVGSQGKALNTQYQEA
STAYKSLQLKWFQGQAAILARELKPHEPCPVCGSSAHPQPAVSHEDLPTELQLQAAQDAE
ALALDNLNKARAEYRGLQKQLEAQQQQANELATALGDRVELSLESHRQTLDELTQQAKQA
DAAAQALQQLQQQIKTLQQQESTLTQQLELERERYREQEGKVERLSGQFAEKALRIPEEY
RTLEVLNQAIAHNQQQLEQIKRQIDALRAAQQQAAQQSVAAQTALSAAIERCNGAAELQA
QAQQALLTALDNAGFTDRDALREALLTDEQMQALAEGIETYHRQCALNQSQLTQLKTKLS
ESTSPDLDALEALLTERLAQLKTAEEVWSQLNTRLTLLNNTQTQLAIVDQKAKSLEDEYA
VIGTLADVANGNTGNKISLQRFVLSVLLDDVLLAATQRLHLMSKGRYRLLRKEDRSKGNK
ASGLELEVEDAYTSKVRPVATLSGGESFMAALSMALGLSDVVQAYAGGIKLDTLFIDEGF
GSLDQDSLELAIRTLMDLQSAGRMIGVISHVSEMKEQIGTRIDILKTSHGSEIKVILP
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgaagccactcacgctgtcaatgtcggcctttggccccttcgcctcgactcaaactatt
gattttaccgaactgggggataaccccttattcctgatcaacgggccaactggtgcgggc
aaaactacgctgctcgacggaatttgttttgcactttacggcaaaaccacaggtaacgag
cgtgaaggcagccagatgcgctgcgatatggccgatgataacttgctcaccgaggtgact
tttagttttcaattaggcagtacgggttatcgtattcgccgcgtccccgagcaggaaaga
ttaaagaaaagcggtgatggctcaacggtacaaaagagtgaggcacagctgtataagatt
gccccagatggcagtgaaacccttatcgtcgccagtaaagtgtcagacgccacggccgaa
atcgaggctctaactggcctagatgtggagcagttccgtcaagtgatggtgctgccgcag
gggaaatttcgtgaattgctgatggccgactctaaggcgcgtgagcaaatttttagccag
ctatttcaaactcatatttataaacgcatcgaagataccctaaaagccaaggcggcggat
attcgcaaccttgtcaaagagcagcgcgcccgccgtgacggtattttgcaaacggcagca
ctgacatccgatgatgaacttgccgcagagtttagtcacattgaacccgaatttgcggcg
gcaacggcggcaaaggagcagagtgttgcggcgcatttagcggcattaaaacagcgtgat
agcgcgcagcaactctttgctgaatttactcgcttacaggaattacaggttgaggcgctt
caccttaatgagcagcaagcgcagattgcaacccaaacgacgcggcttgacgtcgccaag
caagcattacgggtaaaacacttattagataatgccttatcgcgggagcaagaagcgagt
ctcgccgccgctcagcgcgatagcgcgcagtcgacattcgatgccgctaagctcgcactc
gctcatgctgaaactgcggcgcaggaaatcattcccctcgaacataagctgcgtgaggtt
gagcagcaatacagtcatctcagtgccttagtgccacagctggcagagtttgccagcctt
gaacaagctttagcgcaggctaaagagattctacaacacaccaagttgcaggggcaggag
agtaaaaatgcgcttgcaacgctagtggagcagcgcagccattgtgagaatcaactgcca
gccttgcagcagcaaagcgagcagcaacttgccacagcgcaggcgctgcagcagtaccgt
catatgctcgagcagttcaagcagtggcagcagatatgtgccaaagtcgcacacactcaa
ggattgcttgagcaggttggctcacaaggaaaagcgcttaatacccaatatcaagaagcc
tcaacggcttataagtctttgcaactgaagtggtttcaaggtcaggcagctattttagct
agagagttaaaaccccatgaaccatgtccggtttgtggcagttcggcccatcctcaaccc
gcggtgagccatgaggatttaccaacggaactgcaattgcaggcggcgcaggatgccgag
gccttggcgctcgataatcttaataaagcgcgggcagaatatcgcgggctgcaaaaacaa
ttagaagcacagcaacagcaggcgaatgagctggcaacagcccttggcgatagggttgaa
ttgtcgcttgaatcccatcgccaaacgttagacgaactgacacagcaagccaaacaggca
gacgctgcggcgcaagcgctgcagcagttacagcaacagatcaaaaccttgcaacagcaa
gagtcgacgttgacgcagcaattagaacttgagcgtgagcgttaccgtgaacaagaaggc
aaagtcgagcgcttatcgggtcaatttgctgaaaaagcgctgcggatcccagaagaatac
cgaacactggaggtattaaatcaagcgattgcacataaccagcaacaactcgagcagata
aaacgtcagattgatgcgctcagagccgcgcagcagcaggctgcgcagcagagtgtggcg
gcgcaaacggcattatcggcggcgatagagcgttgtaatggcgcggcagagctgcaggcg
caagcacagcaggcgctactgacggcactggataacgcaggctttaccgatagagatgca
ttgcgcgaggccttgttaacggatgagcaaatgcaggcgctagctgagggcatagagacc
tatcataggcagtgcgccttaaatcagtcgcaactgactcagcttaaaaccaagttgagc
gagtcgacatcacccgatcttgatgccttagaggccttgctcacggagcgactcgcacag
cttaaaacggcggaagaggtatggagtcaactcaacactcggctcaccctacttaacaat
acccaaactcagctggcgattgttgatcaaaaggccaaatcccttgaggatgaatacgca
gtgattggcactttggccgatgttgccaatggtaatacgggcaacaaaatttcactgcaa
cgctttgtgcttagcgtattgctcgacgatgtgttgcttgcggcaacgcagaggctgcat
ttaatgagtaaaggtcgctaccgattattgcgcaaagaagacagatctaagggcaataag
gcctctgggctagagcttgaagtcgaggatgcctacacctctaaagtgcgtcccgtggcg
accttaagtggtggtgagagttttatggcggccttgtcgatggccttgggtttatcggat
gtggttcaagcctacgcaggggggataaaactcgacaccttatttatcgacgaaggcttt
ggcagcttagatcaggactcactcgaacttgccattcgaaccctgatggatttgcagtcg
gcgggcaggatgattggggtgatttcccatgtgtctgaaatgaaagagcagataggcacc
cgaattgatatcttgaaaacctcccatgggagtgaaatcaaggtgattttgccttag
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