Shewanella mangrovisoli: K0H60_15890
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Entry
K0H60_15890 CDS
T09316
Symbol
rluD
Name
(GenBank) 23S rRNA pseudouridine(1911/1915/1917) synthase RluD
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
smay
Shewanella mangrovisoli
Brite
KEGG Orthology (KO) [BR:
smay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smay03009
]
K0H60_15890 (rluD)
Enzymes [BR:
smay01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
K0H60_15890 (rluD)
Ribosome biogenesis [BR:
smay03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
K0H60_15890 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
TruB_N
Motif
Other DBs
NCBI-ProteinID:
QYK08281
LinkDB
All DBs
Position
complement(3638002..3638973)
Genome browser
AA seq
323 aa
AA seq
DB search
MTQEINLKSEISATQTGLRLDQALAELFPDYSRTRIKEWILSDAVYVDGVMVNKPREKVF
ELQRIEINATLEEEVHAAAQAIELDIVYEDDDILVINKQAGLVVHPGAGNADGTLMNALL
HHCPNIEHVPRAGIVHRLDKDTTGLMVVAKTVEAQTHLVAALQAREITREYEAIVLGTMT
AGGTVDEPIGRHPTKRTHMAVHHSGKPAVTHYRVAEKFRNHTRLRLRLESGRTHQIRVHM
AYIGHVLVGDPVYGGRPKPPKAASPEFFEILKNFKRQALHAVRLELAHPVTCEIMSWTAP
IPEDMVILTKALRQDTLEHPVEY
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgacacaagagattaatctaaaaagcgagatttcggcaacacaaactggcctgagattg
gatcaagcactggctgagttgttcccagattactcgcgcacacgcatcaaggaatggatc
ctatctgatgcagtctatgttgatggcgtgatggtgaataagccgcgtgaaaaggtattc
gagctgcagcgcattgaaattaatgccacgctcgaagaagaagtgcatgcggccgcacaa
gctattgagctggatattgtctatgaagacgatgatatcttagtcatcaataaacaggcg
ggcttagtggttcaccccggtgcaggcaatgccgatggcactctgatgaacgccctgctg
catcactgccctaatattgagcacgtgccacgtgcgggtattgtgcatcgtctggataaa
gacaccacaggtttgatggtggtggccaaaacggttgaagcccaaacccatttagtggct
gcgttgcaagcccgtgaaatcacccgtgagtatgaggcgattgtcctcggcactatgacg
gcgggcggtacagtcgatgaacctattggtcgtcatccgacaaaacgcacccacatggcg
gtgcatcattcgggtaaacctgcggtgactcactaccgtgtggcggaaaaattccgtaat
cacacccgtttaagattgcgtttagaatcgggccgtactcaccaaatccgcgtgcatatg
gcatatattggccatgtgttggtgggcgacccagtttatggcggtcgtccaaaaccacca
aaagcagcaagccctgagtttttcgagatcctgaaaaactttaaacgccaagcgctccat
gcggtgcgtctggagttagcgcatcctgtgacctgtgaaatcatgagctggaccgcgcct
atccctgaagacatggtgattctgactaaagcgctgcgtcaagataccttagaacaccct
gtcgagtactaa
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