Shewanella mangrovisoli: K0H60_16540
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Entry
K0H60_16540 CDS
T09316
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
smay
Shewanella mangrovisoli
Pathway
smay00630
Glyoxylate and dicarboxylate metabolism
smay00680
Methane metabolism
smay01100
Metabolic pathways
smay01120
Microbial metabolism in diverse environments
smay01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
smay00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
K0H60_16540 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
K0H60_16540 (fdhF)
Enzymes [BR:
smay01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
K0H60_16540 (fdhF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Pyr_redox_2
Molydop_binding
Fer4_20
Molybdop_Fe4S4
Pyr_redox
Fer2_4
Pyr_redox_3
NAD_binding_8
Fer4_7
Fer4
DAO
HI0933_like
Fer4_8
NAD_binding_7
Fer4_6
Thi4
Fer4_18
FAD_oxidored
GIDA
FAD_binding_3
FAD_binding_2
Fer4_22
Fer4_2
Fer4_9
MurD-like_N
Fer4_Nqo3
Fer4_10
AlaDh_PNT_C
Amino_oxidase
Fer4_16
Fer4_21
Lys_Orn_oxgnase
Shikimate_DH
NADH-G_4Fe-4S_3
Motif
Other DBs
NCBI-ProteinID:
QYK08401
LinkDB
All DBs
Position
3775470..3779768
Genome browser
AA seq
1432 aa
AA seq
DB search
MIELNIDNHSVTAEPNDNLLQAARKAGIAIPSLCDPTDATRQLGAAPNANKQDCNLCLVQ
IENTDASLRCVKACETPAEAGMKVITQSAYLTKQRQAALSTILSDHFADCEAPCQQACPA
GVDVQTYLYHIAQGDHTQAIKVIKDTLPLPLSIGRVCPAFCESECRRGLVDDPIAIRQLK
RHAADLDLADDEQGNSYQPARLADTGKKIAIIGAGPAGLSAGYYLSNQGHNVEIFETMPK
AGGWLRYGIPEYRLPKAILDKEIELLCRNGLTIHTDTRLGHEIHLAQLVTDFDAVCLAIG
AQKAVPMNYKGSALAGCYLGVDFLKDHCLDKQLKLGKKVAVIGGGNTAIDCARTAVREGC
DVTLIYRRTRAEMPAEAYEVHEAEVEGVKFHFLTNPIENHGDANGQVEAVTFSKMALGEA
DASGRRAPVDTGETFTEAFDTVIAAVSQAPDLSFMQDPMGQLSQGELALSRWNTLIGCEQ
TMSSGVEKLFVMGDARRGPATAVAAIGDGRKAAIAIDKMLKIGLSCDLHAHEFNSVKTIP
SALVPSALKQTETSSKAGSTFYPHTPLQPRLKMPELTALQRLLNYSEVELGFPADAAMQE
AARCLECACQANTDCKLRDYATDYGVEAKSLTTENARHFSVDKSAPFIQFDANRCISCGK
CVDVCQQQSGHCAIQFANDSYQALPQSISPTEERRAPRVGFSASMADSHCVQCGNCVQVC
PTGALVDARDKRQGDSTELKTASTICTYCGVGCRLDLKIDHNANRIRHIEGNKDSVVNQG
MLCVKGRFGFDFIHSDKRLTTPLIRKNGKLQPTSWPEAIAYVAKRLTEIKQKDGSNALAS
LASAKATNEDNFMLQKFVRSVLGTNNIDHCARLCHSSTVTGLQQSIGSGAMTNDIPSIKD
SDVIFILGSDTTCAHPIIASKIQQAVMQHGARLLVADPKRVGIAEKAELYVAHRPGTDVM
LLNAIMAEIIRHDWQDKAYIAERTEGIEALYAELAKEDYSLENAALITGVRAEDIARLAR
TIGTAEKTAVYYAMGITQHTTGHDNVTAISNLQLLCGNIGVSGAGINPLRGQSNVQGACD
MGALPNYFTGYQKVTDLHARMRFENHWQTPLSGEIGVTATHMMHDIAKGKIKALYVMGEN
PVLSDPDQAHVLNALSQIEFLVVQDIFLTETAELAHVVLPAAAFVEKRGHFTNTERRVQR
LEQALASPGEALPDWQIVQAVANAMGACWDYANEEAIWREINELTPQYRGIRWDRLSANA
EGKISQGIQWPCPDETHPGTPIMHQSQFTRGLGLFTPVSYRLPAEMPCNEYPLTLSTGRL
LEQFHTGTLTRKTPGLDLLGAPKVMISVYDAEQLGINNGDKLRLTTRRGEIEIDAFVTKR
ARAGVLFLPFHFVEAAANKLTINALDPVAYIPEYKVCAVRAEKVIAKVSETA
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atgatagaacttaacatcgacaatcacagcgtcacggccgagccgaacgataacctattg
caagcggcccgtaaggcaggcatagccattccgagtttgtgcgatccaacggacgccaca
cggcaattgggcgcagctcctaacgccaataaacaggactgcaacctctgcctagtgcaa
atcgaaaataccgatgccagcctgcgctgcgttaaagcctgtgaaacacccgccgaagcg
ggcatgaaagtcatcacccaatcggcatatttaaccaaacagcgccaagctgcactgagc
acaattttaagtgaccactttgccgattgtgaggcgccctgccaacaggcctgcccagcg
ggcgtcgatgtgcaaacttacctgtaccacattgcccaaggcgaccatacccaagccatt
aaagtcattaaagacactctgccgctaccgctgtcgattggccgagtctgccccgcgttt
tgcgagagcgaatgtcgccgcggcctcgtcgatgatcccattgccattcgtcaacttaag
cgccacgccgccgatttagacttggccgatgatgagcaaggcaatagctatcaaccagca
cgcctcgcagacacgggtaaaaagattgccattattggcgcgggccccgctggcttaagc
gcgggttattacctgtcaaaccaaggtcataatgttgagatttttgaaaccatgcccaag
gcgggcggctggctgcgctacgggatccccgaataccgtttacctaaggcgattctcgat
aaagaaatcgagctgctgtgccgtaatgggttaaccattcatacggatactcgcctcggc
catgaaattcacttagcccagctggtcaccgatttcgacgctgtgtgcctcgccatcggc
gcccaaaaagcggtaccgatgaactacaaaggctcagcgcttgcgggctgttaccttggg
gtggattttcttaaggatcattgcctcgataagcaattgaagttaggcaaaaaagtcgcc
gtgattggtggcggcaacaccgccatcgactgcgcacgcaccgccgtacgcgaaggctgc
gatgtcaccttaatctaccgccgtacccgcgccgaaatgcccgccgaagcctacgaagta
cacgaggccgaagtcgaaggcgtaaaatttcactttttaaccaatcccattgaaaatcat
ggcgatgccaatggacaggtagaagctgtcaccttcagcaaaatggcgctcggcgaagcc
gatgcctcgggcagacgcgcgcccgtggacacgggagaaacctttaccgaggccttcgat
accgttatcgccgccgtctcccaagcgccggatctgagttttatgcaggatcctatgggg
caactcagccagggcgaactggcgctgagccgctggaacacgctaattggttgtgagcaa
accatgtcatcgggagtcgaaaaactgtttgtgatgggcgatgcccgcagaggacctgcc
accgccgtagccgcgattggcgatggccgtaaagcggcaatcgctattgataagatgcta
aaaattggccttagctgcgatttacatgcccatgagtttaactcggtcaaaaccattccc
agcgccctcgttccaagtgcccttaagcaaaccgaaacaagctcaaaagcagggtcaacg
ttttatccccatacgccgcttcaaccccgcttgaaaatgcccgaactcacggcgctgcaa
cggctgctgaattacagtgaagttgagctaggttttcccgccgatgccgctatgcaagag
gcggcacgttgtctcgagtgcgcctgtcaggccaataccgactgtaagctgagggactac
gccacggattacggtgtcgaagccaaaagcttaaccactgaaaatgcgcgacatttcagt
gtggataagagcgcgccctttattcaattcgatgccaaccgctgtattagctgcggcaaa
tgcgtcgatgtgtgtcagcagcagagtggccactgcgcgatccaatttgcgaatgactcc
taccaagcactgccacagagcatcagtcctactgaagaacgaagagcccccagagtcggc
tttagtgcgagcatggccgatagccactgcgtgcaatgcggtaactgtgtacaggtttgt
ccgacgggggcactggtcgatgcccgagataaacgccaaggcgatagcacagagttaaaa
accgcctcgacgatttgtacttactgcggcgtgggctgtcgtctagaccttaaaatcgac
cacaacgccaatcgcattcgtcatatcgaaggcaataaggactcggtcgttaaccaaggc
atgctgtgcgttaagggacgttttggcttcgattttattcatagcgacaaacgcctcacc
acaccattaatacgtaaaaacggcaagttacaaccgactagctggcccgaagccatcgcc
tatgtggcaaaacgcttaaccgagataaaacaaaaagatggcagcaatgccctcgccagt
ctcgcctcagcaaaagccaccaacgaagataactttatgctgcaaaagtttgttcgcagt
gttcttggcaccaacaatatcgatcactgcgcccgcctctgccactcatcgacggtaaca
ggcttgcagcagagtattggtagcggcgccatgaccaatgatataccgagcattaaggac
tcggacgtcatctttatcttaggttcggataccacctgcgcccatccgattatcgcctca
aaaatccagcaggcggtgatgcagcacggcgcgcgtttactggttgccgatccgaagcgg
gttggcattgccgaaaaggccgagctgtatgtcgctcacagaccggggacggatgtgatg
ctgctcaacgccattatggcggaaattattcgccacgattggcaggataaagcctatatt
gccgagcgcaccgaaggcattgaggccctctatgcagagttagccaaggaggattactcc
ctcgaaaacgcagcgcttatcacgggcgtaagggccgaagacattgcccgcctcgcgcgt
accataggcacggccgaaaagaccgcggtttactacgccatgggcatcactcaacatacg
acggggcacgataacgtcaccgccatctctaatttgcagctactttgcggcaatataggt
gtgtcaggcgcgggtattaatccacttcgcggccagagtaacgtccaaggtgcctgcgac
atgggcgccctacccaactattttaccggttaccaaaaggtcactgatcttcatgccaga
atgcgcttcgaaaaccattggcaaaccccgttatcgggggaaattggcgtcactgccacc
catatgatgcacgatattgccaagggcaaaattaaagccttgtatgtgatgggtgagaat
ccagtgctcagcgatcccgaccaagcccatgtgcttaatgcattgagccaaatcgagttt
ctggtggtgcaggatatctttttaaccgagacggccgagcttgcccatgtggtcttaccc
gccgccgcatttgtggaaaaacgcggtcactttaccaataccgaacgtcgggtgcagcgg
ctcgagcaggcactcgcctcaccgggtgaggccttacccgattggcagatagtgcaagcc
gtcgctaacgccatgggcgcatgctgggactatgccaacgaagaggccatctggcgcgaa
atcaacgaacttactccgcagtatcgcggcattcgttgggacagattaagtgccaatgcc
gaaggtaagatttctcaagggattcaatggccttgtccagatgaaacccatcccggaacg
ccgattatgcatcagagccaattcactcgaggcttaggcttatttacgcctgtcagttat
cgccttcccgccgagatgccctgcaacgagtatccgctaacgctctcaacggggcggcta
ttggagcaattccacacgggcacactcacccgtaaaacaccagggttggatttactcggc
gcgcctaaggtaatgatttcggtttatgatgcggagcaactggggataaacaatggcgat
aaacttcgcctcaccacccgtcgcggagagattgaaatcgatgcctttgtgactaaacgc
gcccgggcgggcgtgctgttcctgccgttccattttgtggaagcggcggcgaataagctc
actatcaatgccttagatcctgtggcttatattcccgaatacaaggtctgtgcggtcaga
gctgaaaaggtgatagcaaaggtgagtgaaacagcttaa
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