Shewanella mangrovisoli: K0H60_16695
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Entry
K0H60_16695 CDS
T09316
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
smay
Shewanella mangrovisoli
Brite
KEGG Orthology (KO) [BR:
smay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smay03036
]
K0H60_16695 (xerD)
Chromosome and associated proteins [BR:
smay03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
K0H60_16695 (xerD)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Phage_int_SAM_5
Integrase_1
DUF3435
Motif
Other DBs
NCBI-ProteinID:
QYK08431
LinkDB
All DBs
Position
complement(3819165..3820067)
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AA seq
300 aa
AA seq
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MAKTYQCDPLIDAFLDDLWSSKGLSDNTLSAYRTDLRHFDRYQQGQGLRLIEVGQADVRA
YLAYRVEQQFARTSSARLLSSLRRFYTYLLQTKQIAGDPMALIESPKLSRQLPDSLSESQ
VDRLLAEPNVDDPVECRDKAMLELLYATGLRVSELVGLTMEQMSLRQGLVRIVGKGGKER
LVPMGELAITEVERYLSFARHELLGNIQSDVVFPSKRAQMMTRQTFWHRIKLYASRAGIE
TELSPHTLRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHVARARLQELHQQHHPRG
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
gtggctaaaacctatcagtgcgatccgcttatcgatgcctttctcgatgatctttggtcc
agcaagggcttaagtgataacaccttgagtgcctatcgcaccgatttacgccattttgac
cgctatcaacagggccaaggcctgcggttaatcgaggtggggcaagccgatgtgcgtgcc
tatttagcctaccgcgtcgagcaacaatttgcccgcaccagtagtgcacgtctactgagc
agtttacggcgtttttacacctatttactgcaaaccaaacagattgctggcgatcctatg
gcgttaattgaatcgcctaaattgagtcggcagttgcccgattccttaagtgagtctcag
gtcgatagattgctggccgagcccaatgtggacgaccccgtcgaatgccgtgataaagcc
atgcttgaactcttatacgccactggattacgggtgagcgagctggtgggactcaccatg
gagcagatgagtttgcgccaaggtttagtgcggattgtgggtaagggcggtaaagagcgc
ttagtgcctatgggcgagctggccattaccgaggtcgagcgttacttaagctttgcgcgc
catgaacttttgggcaatatccagtccgatgtggtatttccttcgaagcgggcacagatg
atgacaaggcaaaccttttggcatcgtatcaagctctatgcgagccgtgctggcatcgaa
accgagctttcgccccataccctgcgacatgcctttgccacccacttacttaaccatggc
gccgacctaagagtagtacaattactcttaggccacagtgacttatcgaccactcaaatt
tatacccatgtggctcgagcgagattacaagagttgcatcaacaacatcatcctcgaggt
taa
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