Shewanella mangrovisoli: K0H60_16950
Help
Entry
K0H60_16950 CDS
T09316
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
smay
Shewanella mangrovisoli
Brite
KEGG Orthology (KO) [BR:
smay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smay03009
]
K0H60_16950 (dbpA)
Enzymes [BR:
smay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
K0H60_16950 (dbpA)
Ribosome biogenesis [BR:
smay03009
]
Prokaryotic type
rRNA helicases
K0H60_16950 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_30
U-box
Helicase_C_2
AAA_19
CMS1
AAA_22
YlmH_RBD
Motif
Other DBs
NCBI-ProteinID:
QYK11155
LinkDB
All DBs
Position
complement(3881088..3882464)
Genome browser
AA seq
458 aa
AA seq
DB search
MAFSTLKLKPELLENLTTMGYHEMTPIQAQSLPAILAGEDVIGQGKTGSGKTAAFGLGLL
NKLDVKRFRIQTLVLCPTRELADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQIGSLEHG
AHIIVGTPGRIVDHLERNRLDLSNLNMLVLDEADRMLEMGFQPQLDAIIEQSPRERQTLL
FSATFPEQIQSIAKQIMYDPVMVKVAVTHEKSTIEQHFYHLDDDKARMQALQLLLLDRKP
ESAVVFCNTKRETQKVADELSDAGFSVIALHGDLEQRDRDETLLQFANKSACVLVATDVA
ARGLDIDALDAVFNYHVAYDTEVHIHRIGRTGRAGSKGAAFTFFDDQDGYKIALLEEYLE
RDIQSEALPSLSLLGTAPNAPTMITLQIDGGKKEKLRPGDILGALTGENGIEGSQVGKIL
VTDYRAYVAVNRKVAKKALSKITSGRIKGKSYRAWLMK
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggctttctcgactcttaagctaaaacccgaactgcttgagaaccttaccactatgggc
tatcacgaaatgacgccaattcaggcgcagagtctgccagccattttagcgggcgaggat
gtgattggtcagggcaagacgggttcgggtaaaacggcggccttcggtttaggtctgctg
aacaagttagatgtgaagcgttttcgcattcaaaccttagtgctgtgtccaacccgcgaa
ctggccgaccaagtggcgcaggagatccgcacactggcgcgtggtattcacaacgtaaaa
gtgctcaccctctgcggcggcgtgcctatggggccgcaaattggttcgctcgagcatggc
gcccacattatcgtcggaacgccagggcggattgtcgatcacttagagcgtaaccgttta
gacctaagcaacctgaatatgctcgtactggacgaagccgaccgtatgctggaaatgggc
tttcagccacagctcgatgcgattatcgagcagtcgccacgcgagcgccaaaccctgctg
tttagtgcgaccttccccgagcaaattcagtcgattgctaagcaaattatgtacgaccca
gtgatggtgaaagtggccgtgacccacgaaaagagcaccatcgagcagcatttctaccac
ttggatgacgacaaggcgcgcatgcaggcgctgcaattattgctgctggatcgtaagccc
gagagcgccgtggtgttttgtaataccaagcgcgaaacccaaaaagtggccgatgaacta
agtgatgctggctttagcgttatcgccctacatggggatttagaacagcgcgaccgggat
gaaaccctgctgcaatttgccaacaagagtgcctgtgtgttggtggcgaccgacgtggct
gcccgtggtttagatatcgatgcactggacgcggtatttaactaccacgtggcctatgat
accgaagtgcatattcaccgtattggccgtaccggccgtgcgggcagtaagggtgcggct
tttaccttctttgacgatcaagatggctacaagattgccctgttagaagagtatttagag
cgagatattcagagcgaagccttgccatcattaagtttgctgggcacagcgcccaatgcg
ccaaccatgatcacccttcaaatcgatggtggtaaaaaagagaagcttcgccccggcgat
atcctcggggccctcactggggagaatggtatcgaaggctcgcaggtcggcaaaatcctt
gtaaccgactaccgcgcctatgtggcggtaaatcgcaaagtcgctaaaaaggcgctgagc
aaaatcaccagcggccgcattaagggtaagtcttaccgcgcgtggttaatgaaataa
DBGET
integrated database retrieval system
