Shewanella mangrovisoli: K0H60_17980
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Entry
K0H60_17980 CDS
T09316
Symbol
ssb
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
smay
Shewanella mangrovisoli
Pathway
smay03030
DNA replication
smay03430
Mismatch repair
smay03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K0H60_17980 (ssb)
03430 Mismatch repair
K0H60_17980 (ssb)
03440 Homologous recombination
K0H60_17980 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smay03032
]
K0H60_17980 (ssb)
03400 DNA repair and recombination proteins [BR:
smay03400
]
K0H60_17980 (ssb)
03029 Mitochondrial biogenesis [BR:
smay03029
]
K0H60_17980 (ssb)
DNA replication proteins [BR:
smay03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
K0H60_17980 (ssb)
DNA repair and recombination proteins [BR:
smay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
K0H60_17980 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
K0H60_17980 (ssb)
Mitochondrial biogenesis [BR:
smay03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
K0H60_17980 (ssb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
SSB_1
Lin-8
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QYK08674
LinkDB
All DBs
Position
complement(4133027..4133734)
Genome browser
AA seq
235 aa
AA seq
DB search
MASRGVNKVILVGNLGQDPEVRYMPNGNAVANITVATSESWKDQQGQQQERTEWHRVVLF
GKLAEITGEYLRKGSQVYLEGKLQTRKWKDQSGQDRYSTEVVIDQSGSMQMLGGRNQGQS
QGQGQGAPMGGMQQNAGYQAAPAQTAPAQNQYAPAQQSYQAPAQQPQSGYNQQPAQQSYG
QQQQSHAQPQQSGYAPKPAAPAYQAPAAPAQRPAPQPQQNFTPDLDDGWDDDIPF
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggccagtcgtggtgttaacaaggtaattttggttggcaatttgggacaagatccagaa
gtacgttacatgccaaacggtaacgcagtcgctaacatcacagtagcgaccagcgaatcg
tggaaagaccaacaaggtcaacagcaagagcgtactgaatggcaccgtgtggttctgttt
ggcaagttggctgaaattacgggtgagtacctgcgtaaaggttcacaggtttacctcgaa
ggtaaactgcaaacgcgtaagtggaaagaccaaagcggtcaagatcgttacagcactgaa
gtggttatcgaccaaagcggtagcatgcaaatgttaggcggccgcaatcaaggccaaagt
caaggtcaaggccaaggtgcacctatgggtggcatgcaacaaaacgcgggttaccaagcg
gctccggctcaaactgcgccagcgcaaaaccaatacgcgccagcacagcaaagttaccaa
gcacctgcacagcaaccacaatctggctacaatcagcagcctgcccagcaaagctatggc
cagcaacagcaatcccatgctcagccacaacagagtggttatgcgcctaagcctgctgca
ccagcctatcaagcaccagcggcaccagcacaacgtccagcgccacagccacaacaaaac
ttcaccccagatttggatgatggttgggacgacgatatcccgttctaa
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integrated database retrieval system
